RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 LCN1P1Q5VSP4 162 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 CYP2R1Q6VVX0 501 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 C16orf82Q7Z2V1 217 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 PGAM4Q8N0Y7 254 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 OR51E1Q8TCB6 317 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 STMN2Q93045 179 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 ZNF714Q96N38 554 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 MROQ9BYG7 248 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 PBOV1Q9GZY1 135 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 MYLK2Q9H1R3 596 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 GPR84Q9NQS5 396 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 SLC22A13Q9Y226 551 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 MINOS1-NBL1R4GNA1 71 aa11.43□□□□□ -0.58
VARS-228ENST00000495010 KMT2CQ8NEZ4 4911 aaKnown RBP11.42□□□□□ -0.58
VARS-228ENST00000495010 K7N7A8 449 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 PRODHO43272 600 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 NOS1APO75052 506 aaPredicted RBP11.42□□□□□ -0.58
VARS-228ENST00000495010 DNAJC8O75937 253 aaPredicted RBP11.42□□□□□ -0.58
VARS-228ENST00000495010 CHRM2P08172 466 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 JUNBP17275 347 aaPredicted RBP11.42□□□□□ -0.58
VARS-228ENST00000495010 COL10A1Q03692 680 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 CLVS2Q5SYC1 327 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 LDLRAD2Q5SZI1 272 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 ZBTB49Q6ZSB9 765 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 ASRGL1Q7L266 308 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 TRPM8Q7Z2W7 1104 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 ZNF676Q8N7Q3 588 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 OR10G2Q8NGC3 310 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 NRIP2Q9BQI9 281 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 INPP5EQ9NRR6 644 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 GPR173Q9NS66 373 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 FAM206AQ9NX38 181 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 GTF2A1LQ9UNN4 478 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 KLHDC2Q9Y2U9 406 aa11.42□□□□□ -0.58
VARS-228ENST00000495010 hADV38S2A0JD32 116 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 PSMD9O00233 223 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 DHRS3O75911 302 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 LPLP06858 475 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 ALOX5APP20292 161 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 BRS3P32247 399 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 MAGEA2P43356 314 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 ARHGDIBP52566 201 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 EGFEM1PQ0D2K5 195 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 ZNF829Q3KNS6 432 aaPredicted RBP11.41□□□□□ -0.58
VARS-228ENST00000495010 TCTEX1D4Q5JR98 221 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 SLC35D3Q5M8T2 416 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 OR2T5Q6IEZ7 315 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 DEGS2Q6QHC5 323 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 C16orf89Q6UX73 402 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 CD300LDQ6UXZ3 194 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 OR51D1Q8NGF3 324 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 OR2T29Q8NH02 315 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 TEAD3Q99594 435 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 NIPSNAP1Q9BPW8 284 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 ELAC2Q9BQ52 826 aaKnown RBP11.41□□□□□ -0.58
VARS-228ENST00000495010 CHID1Q9BWS9 393 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 NDE1Q9NXR1 346 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 SESN1Q9Y6P5 492 aa11.41□□□□□ -0.58
VARS-228ENST00000495010 IGHV2-26A0A0B4J1V2 119 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 FAM90A22PA8MWA6 464 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 HMGN1P05114 100 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 HTR1DP28221 377 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 HCCSP53701 268 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 MEF2CQ06413 473 aaPredicted RBP11.4□□□□□ -0.58
VARS-228ENST00000495010 EDDM3AQ14507 147 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 GINS1Q14691 196 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 SPATS1Q496A3 300 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 ABCA11PQ4W5N1 156 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 UNQ9370/PRO34162Q6UXP9 181 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 CPOQ8IVL8 374 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 ZNF649Q9BS31 505 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 MCRIP2Q9BUT9 160 aaKnown RBP11.4□□□□□ -0.58
VARS-228ENST00000495010 CLEC7AQ9BXN2 247 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 TEX12Q9BXU0 123 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 YIPF3Q9GZM5 350 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 MAGIXQ9H6Y5 334 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 LIN7BQ9HAP6 207 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 HES4Q9HCC6 221 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 VNN3Q9NY84 501 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 ACTR3BQ9P1U1 418 aa11.4□□□□□ -0.58
VARS-228ENST00000495010 ZMAT5Q9UDW3 170 aaKnown RBP11.4□□□□□ -0.58
VARS-228ENST00000495010 PQLC2LA1A4F0 135 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 DLGAP1O14490 977 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 ZNF254O75437 659 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 RIDAP52758 137 aaKnown RBP11.39□□□□□ -0.59
VARS-228ENST00000495010 FAM98BQ52LJ0 330 aaKnown RBP11.39□□□□□ -0.59
VARS-228ENST00000495010 HSP90B2PQ58FF3 399 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 C9orf152Q5JTZ5 239 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 DEFB107AQ8IZN7 70 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 OR8H2Q8N162 312 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 LINC00482Q8N8I6 264 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 GIPC3Q8TF64 312 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 SNX22Q96L94 193 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 FEVQ99581 238 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 SLC25A33Q9BSK2 321 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 TMEM133Q9H2Q1 129 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 NUFIP1Q9UHK0 495 aaKnown RBP11.39□□□□□ -0.59
VARS-228ENST00000495010 IKZF2Q9UKS7 526 aa11.39□□□□□ -0.59
VARS-228ENST00000495010 FAM230AA0A1W2PPH8 454 aa11.38□□□□□ -0.59
VARS-228ENST00000495010 E2F6O75461 281 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms