RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 HOXC12P31275 282 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 RCVRNP35243 200 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 GLRXP35754 106 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 MPV17P39210 176 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 CBX5P45973 191 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 TAS2R19P59542 299 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 FGF12P61328 243 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 ERVS71-1P61550 626 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 MSMPQ1L6U9 139 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 ALKBH6Q3KRA9 238 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 SLC22A6Q4U2R8 563 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 DMRTC1Q5HYR2 192 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 VAX1Q5SQQ9 334 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 PLCXD3Q63HM9 321 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 OR2T2Q6IF00 324 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 MTFR2Q6P444 385 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 C3P1Q6ZMU1 363 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 Q6ZS49 121 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 WDR86Q86TI4 376 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 LINC00596Q86U02 117 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 FJX1Q86VR8 437 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 HOGA1Q86XE5 327 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 ZNF573Q86YE8 665 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 MKXQ8IYA7 352 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 GAPTQ8N292 157 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 OSR2Q8N2R0 312 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 ZNF611Q8N823 705 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 SPERTQ8NA61 448 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 ACBD4Q8NC06 268 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 NUP37Q8NFH4 326 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 OR4C16Q8NGL9 310 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 OR1J1Q8NGS3 322 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 OR51F2Q8NH61 342 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 OR56B4Q8NH76 319 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 ENKURQ8TC29 256 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 RND1Q92730 232 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 HPS1Q92902 700 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 FBXW5Q969U6 566 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 FAM122AQ96E09 287 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 ARHGAP5-AS1Q96IT6 56 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 TRAF4Q9BUZ4 470 aaPredicted RBP5.79□□□□□ -1.48
MSH5-217ENST00000494458 PECRQ9BY49 303 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 BANF2Q9H503 90 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 HES4Q9HCC6 221 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 DECR2Q9NUI1 292 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 MYEF2Q9P2K5 600 aaKnown RBP5.79□□□□□ -1.48
MSH5-217ENST00000494458 PURGQ9UJV8 347 aaKnown RBP5.79□□□□□ -1.48
MSH5-217ENST00000494458 ZNF221Q9UK13 617 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 SVILO95425 2214 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 DSPP15924 2871 aaKnown RBP5.79□□□□□ -1.48
MSH5-217ENST00000494458 SHANK1Q9Y566 2161 aa5.79□□□□□ -1.48
MSH5-217ENST00000494458 TRBV6-6A0A0A6YYG2 114 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 LINC00854A0A1B0GVQ3 168 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 LRP5LA4QPB2 252 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 INMT-MINDY4F8WBC2 141 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 H3BUI4 141 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 J3QT63 122 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 MLNRO43193 412 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 SPRY1O43609 319 aaPredicted RBP5.78□□□□□ -1.48
MSH5-217ENST00000494458 ANGPTL7O43827 346 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 CD3DP04234 171 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 IL5P05113 134 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 ADH4P08319 380 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 GNB3P16520 340 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 SERPINA2P20848 420 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 BMP5P22003 454 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 DTYMKP23919 212 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 PTAFRP25105 342 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 CD40P25942 277 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 BLVRBP30043 206 aaPredicted RBP5.78□□□□□ -1.48
MSH5-217ENST00000494458 FAUP35544 74 aaKnown RBP5.78□□□□□ -1.48
MSH5-217ENST00000494458 MAP1BP46821 2468 aaKnown RBP5.78□□□□□ -1.48
MSH5-217ENST00000494458 NPBWR2P48146 333 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 INPP1P49441 399 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 GPM6AP51674 278 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 RBM11P57052 281 aaKnown RBP5.78□□□□□ -1.48
MSH5-217ENST00000494458 IL13RA2Q14627 380 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 MEF2DQ14814 521 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 CDK10Q15131 360 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 ZMYND11Q15326 602 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 RSU1Q15404 277 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 MPV17LQ2QL34 196 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 PCGF3Q3KNV8 242 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 ZNF718Q3SXZ3 478 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 STEAP1BQ6NZ63 245 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 Q6ZR03 302 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 SLC36A1Q7Z2H8 476 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 RTN4RL2Q86UN3 420 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 GLCCI1Q86VQ1 547 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 OR4D10Q8NGI6 311 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 OR5D18Q8NGL1 313 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 OR10K1Q8NGX5 313 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 OR6F1Q8NGZ6 308 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 LILRB4Q8NHJ6 448 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 NPRL2Q8WTW4 380 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 TMEM171Q8WVE6 324 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 SNAPC3Q92966 411 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 MRGPRFQ96AM1 343 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 MUCL1Q96DR8 90 aa5.78□□□□□ -1.48
MSH5-217ENST00000494458 RNF170Q96K19 258 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms