RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 TK1P04183 234 aa13.5□□□□□ -0.25
PTPRU-208ENST00000493601 COX7A1P24310 79 aa13.5□□□□□ -0.25
PTPRU-208ENST00000493601 BMXP51813 675 aa13.5□□□□□ -0.25
PTPRU-208ENST00000493601 CRIP3Q6Q6R5 217 aa13.5□□□□□ -0.25
PTPRU-208ENST00000493601 PLEKHG7Q6ZR37 379 aa13.5□□□□□ -0.25
PTPRU-208ENST00000493601 BCDIN3DQ7Z5W3 292 aaKnown RBP13.5□□□□□ -0.25
PTPRU-208ENST00000493601 CALHM1Q8IU99 346 aa13.5□□□□□ -0.25
PTPRU-208ENST00000493601 TCEANCQ8N8B7 351 aa13.5□□□□□ -0.25
PTPRU-208ENST00000493601 OR4M1Q8NGD0 313 aa13.5□□□□□ -0.25
PTPRU-208ENST00000493601 UTP4Q969X6 686 aaKnown RBP13.5□□□□□ -0.25
PTPRU-208ENST00000493601 PKIBQ9C010 78 aa13.5□□□□□ -0.25
PTPRU-208ENST00000493601 PLEKHA1Q9HB21 404 aa13.5□□□□□ -0.25
PTPRU-208ENST00000493601 OR14J1Q9UGF5 321 aa13.5□□□□□ -0.25
PTPRU-208ENST00000493601 ENOPH1Q9UHY7 261 aa13.5□□□□□ -0.25
PTPRU-208ENST00000493601 CCL3L1P16619 93 aa13.49□□□□□ -0.25
PTPRU-208ENST00000493601 IL24Q13007 206 aa13.49□□□□□ -0.25
PTPRU-208ENST00000493601 ZNF273Q14593 569 aa13.49□□□□□ -0.25
PTPRU-208ENST00000493601 AADACL4Q5VUY2 407 aa13.49□□□□□ -0.25
PTPRU-208ENST00000493601 SLX4IPQ5VYV7 408 aa13.49□□□□□ -0.25
PTPRU-208ENST00000493601 C12orf73Q69YU5 71 aa13.49□□□□□ -0.25
PTPRU-208ENST00000493601 Q6ZSR3 168 aa13.49□□□□□ -0.25
PTPRU-208ENST00000493601 C1QL4Q86Z23 238 aa13.49□□□□□ -0.25
PTPRU-208ENST00000493601 C11orf42Q8N5U0 333 aa13.49□□□□□ -0.25
PTPRU-208ENST00000493601 KLHDC1Q8N7A1 406 aa13.49□□□□□ -0.25
PTPRU-208ENST00000493601 ASCC1Q8N9N2 400 aaKnown RBP13.49□□□□□ -0.25
PTPRU-208ENST00000493601 OR14K1Q8NGZ2 314 aa13.49□□□□□ -0.25
PTPRU-208ENST00000493601 FOXRED1Q96CU9 486 aaPredicted RBP13.49□□□□□ -0.25
PTPRU-208ENST00000493601 MRM2Q9UI43 246 aaKnown RBP13.49□□□□□ -0.25
PTPRU-208ENST00000493601 SIGLEC9Q9Y336 463 aa13.49□□□□□ -0.25
PTPRU-208ENST00000493601 A0A1B0GTI1 187 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 A6NIN4 97 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 ZAR1LA6NP61 321 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 VGLL3A8MV65 326 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 G3V2T6 193 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 MAGEB4O15481 346 aaPredicted RBP13.48□□□□□ -0.25
PTPRU-208ENST00000493601 RBP4P02753 201 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 KRT8P05787 483 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 PIPP12273 146 aaPredicted RBP13.48□□□□□ -0.25
PTPRU-208ENST00000493601 CCL1P22362 96 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 ERVK11-1P61568 191 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 EFNB1P98172 346 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 ZNF782Q6ZMW2 699 aaPredicted RBP13.48□□□□□ -0.25
PTPRU-208ENST00000493601 BATF2Q8N1L9 274 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 TRMT10AQ8TBZ6 339 aaKnown RBP13.48□□□□□ -0.25
PTPRU-208ENST00000493601 CFHR4Q92496 578 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 SLC7A6OSQ96CW6 309 aaPredicted RBP13.48□□□□□ -0.25
PTPRU-208ENST00000493601 IL4I1Q96RQ9 567 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 SLC7A11Q9UPY5 501 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 SLC22A13Q9Y226 551 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 DSCAML1Q8TD84 2053 aa13.48□□□□□ -0.25
PTPRU-208ENST00000493601 C17orf98A8MV24 154 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 K7N7A8 449 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 CHST1O43916 411 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 MITFO75030 526 aaPredicted RBP13.47□□□□□ -0.25
PTPRU-208ENST00000493601 RPP14O95059 124 aaKnown RBP13.47□□□□□ -0.25
PTPRU-208ENST00000493601 OPN1MWP04001 364 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 OPN1MW2P0DN77 364 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 OPN1MW3P0DN78 364 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 PAX6P26367 422 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 EPHA2P29317 976 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 COL10A1Q03692 680 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 ATP6AP1Q15904 470 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 ANGPTL5Q86XS5 388 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 YIPF7Q8N8F6 280 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 OR13D1Q8NGV5 346 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 WARS2Q9UGM6 360 aaKnown RBP13.47□□□□□ -0.25
PTPRU-208ENST00000493601 FOXJ3Q9UPW0 622 aa13.47□□□□□ -0.25
PTPRU-208ENST00000493601 TBL2Q9Y4P3 447 aaKnown RBP13.47□□□□□ -0.25
PTPRU-208ENST00000493601 FAM230AA0A1W2PPH8 454 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 FAM90A8PA6NJQ4 464 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 SYT7O43581 403 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 GATBO75879 557 aaKnown RBP13.46□□□□□ -0.25
PTPRU-208ENST00000493601 ARG1P05089 322 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 CHRM2P08172 466 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 ZNF728P0DKX0 622 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 VSIG10L2P0DP72 767 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 DLX6P56179 175 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 KDM4DQ6B0I6 523 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 GDPD3Q7L5L3 318 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 SSX6Q7RTT6 188 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 LHFPL4Q7Z7J7 247 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 CATSPERDQ86XM0 798 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 ZDHHC13Q8IUH4 622 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 CCDC54Q8NEL0 328 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 PIFOQ8TCI5 191 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 BCAS4Q8TDM0 211 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 CEP19Q96LK0 163 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 TBX5Q99593 518 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 NKX3-1Q99801 234 aaPredicted RBP13.46□□□□□ -0.25
PTPRU-208ENST00000493601 CDCA4Q9BXL8 241 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 GABARAPL1Q9H0R8 117 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 ABCB10Q9NRK6 738 aa13.46□□□□□ -0.25
PTPRU-208ENST00000493601 A0A1W2PQL4 384 aaPredicted RBP13.45□□□□□ -0.26
PTPRU-208ENST00000493601 ODF3BA8MYP8 253 aa13.45□□□□□ -0.26
PTPRU-208ENST00000493601 ZNF737O75373 536 aa13.45□□□□□ -0.26
PTPRU-208ENST00000493601 OR2T7P0C7T2 308 aa13.45□□□□□ -0.26
PTPRU-208ENST00000493601 EDDM3BP56851 147 aa13.45□□□□□ -0.26
PTPRU-208ENST00000493601 ODF4Q2M2E3 257 aa13.45□□□□□ -0.26
PTPRU-208ENST00000493601 OR8H2Q8N162 312 aa13.45□□□□□ -0.26
PTPRU-208ENST00000493601 C11orf44Q8N8P7 122 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms