RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, human

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN4-215	ENST00000491592	TRAV19	A0A0A6YYK7	116 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	MPTX1	A8MV57	137 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592		A8MXK9	166 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592		G3V4G9	280 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592		M0R233	179 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	IMPA2	O14732	288 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	ZIC3	O60481	467 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	GATB	O75879	557 aa	Known RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	SCO1	O75880	301 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	CPSF4	O95639	269 aa	Known RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	H1F0	P07305	194 aa	Known RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	C8G	P07360	202 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	NGFR	P08138	427 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	ACSM4	P0C7M7	580 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	C8orf88	P0DMB2	117 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	SULT1A3	P0DMM9	295 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	SULT1A4	P0DMN0	295 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	ACP2	P11117	423 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	GTF2F2	P13984	249 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	CD59	P13987	128 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	DUT	P33316	252 aa	Known RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	MPI	P34949	423 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	SSTR5	P35346	364 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	CDKN2A	P42771	156 aa	Known RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	BDKRB1	P46663	353 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	SRP9	P49458	86 aa	Known RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	THBS3	P49746	956 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	PPOX	P50336	477 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	DCDC1	P59894	354 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	NANOS2	P60321	138 aa	Known RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	UBE2M	P61081	183 aa	Known RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	RPS15A	P62244	130 aa	Known RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	RPS4X	P62701	263 aa	Known RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	SLC35B1	P78383	322 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	MXD1	Q05195	221 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	ZNF415	Q09FC8	603 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	BTN1A1	Q13410	526 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	IHH	Q14623	411 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	OPCML	Q14982	345 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	TRAM1	Q15629	374 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	ZNF658B	Q4V348	819 aa	Predicted RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	TP53I3	Q53FA7	332 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	MS4A13	Q5J8X5	152 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	ACSM5	Q6NUN0	579 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	TRIM40	Q6P9F5	258 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	LINC00336	Q6ZUF6	198 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	LRRC28	Q86X40	367 aa	Predicted RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	WDFY1	Q8IWB7	410 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	PIANP	Q8IYJ0	282 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	LGI3	Q8N145	548 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	AQP11	Q8NBQ7	271 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	ADAD2	Q8NCV1	583 aa	Known RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	OR52H1	Q8NGJ2	320 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	OR52P1P	Q8NH57	321 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	CASTOR1	Q8WTX7	329 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	RBP7	Q96R05	134 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	HBEGF	Q99075	208 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	ATF6B	Q99941	703 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	SLC25A33	Q9BSK2	321 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	TMEM204	Q9BSN7	226 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	TSSK6	Q9BXA6	273 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	REG4	Q9BYZ8	158 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	GAREM1	Q9H706	876 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	RHOF	Q9HBH0	211 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	ACKR4	Q9NPB9	350 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	STARD5	Q9NSY2	213 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	TMEM30A	Q9NV96	361 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	SDHAF2	Q9NX18	166 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	TAS2R16	Q9NYV7	291 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	FLRT3	Q9NZU0	649 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	COMMD3	Q9UBI1	195 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	B4GALT7	Q9UBV7	327 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	IL36A	Q9UHA7	158 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	ZNF222	Q9UK12	451 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	RALY	Q9UKM9	306 aa	Known RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	POMT2	Q9UKY4	750 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	FARSA	Q9Y285	508 aa	Known RBP	4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	MTCH2	Q9Y6C9	303 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	CCDC88C	Q9P219	2028 aa		4.05	□□□□□ -1.76
RTN4-215	ENST00000491592	WDR90	Q96KV7	1748 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592		A0A1B0GUS0	222 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	CIB4	A0PJX0	185 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	NAP1L6	A6NFF2	107 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	SERINC4	A6NH21	518 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	VSTM2B	A6NLU5	285 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	GJE1	A6NN92	205 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	SEC14L6	B5MCN3	397 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	SURF4	O15260	269 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	OR1I1	O60431	355 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	EIF4E2	O60573	245 aa	Known RBP	4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	NDUFS7	O75251	213 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	GCM2	O75603	506 aa	Predicted RBP	4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	AQP8	O94778	261 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	SOD1	P00441	154 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	IGHG3	P01860	377 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	PRSS2	P07478	247 aa		4.04	□□□□□ -1.76
RTN4-215	ENST00000491592	ADRA2A	P08913	450 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms