RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 DOCK9Q9BZ29 2069 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 SMARCA4P51532 1647 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 TOP2BQ02880 1626 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 AHDC1Q5TGY3 1603 aaPredicted RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 LMTK2Q8IWU2 1503 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 KDM5BQ9UGL1 1544 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 ADGRL1O94910 1474 aa2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 CHD2O14647 1828 aaKnown RBP2.01□□□□□ -2.09
SNRNP27-204ENST00000487029 C9orf84Q5VXU9 1444 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 RIMS2Q9UQ26 1411 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 WIZO95785 1651 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 TTC21AQ8NDW8 1320 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 IGLV2-18A0A075B6J9 118 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 IGLV3-12A0A075B6K2 115 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 A0A0B4J2E0 115 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 A0A1B0GUH1 482 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 SMIM23A6NLE4 172 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 CENPXA8MT69 81 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 MIF4GDA9UHW6 222 aaKnown RBP2□□□□□ -2.09
SNRNP27-204ENST00000487029 HACD1B0YJ81 288 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF701M0R085 212 aaPredicted RBP2□□□□□ -2.09
SNRNP27-204ENST00000487029 RBBP9O75884 186 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 TNFAIP8O95379 198 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 TGM6O95932 706 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 PTHP01270 115 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 MT-ND4P03905 459 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 IL4P05112 153 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 SERPINB1P30740 379 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 GDI2P50395 445 aaKnown RBP2□□□□□ -2.09
SNRNP27-204ENST00000487029 NAB1Q13506 487 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 FLOT2Q14254 428 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 SPA17Q15506 151 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 OR1Q1Q15612 314 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 MOGQ16653 247 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 TEX30Q5JUR7 227 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 C6orf183Q5T699 404 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 GUSBP11Q6P575 273 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 OPN5Q6U736 354 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 TRMT10CQ7L0Y3 403 aaKnown RBP2□□□□□ -2.09
SNRNP27-204ENST00000487029 NDUFAF7Q7L592 441 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 NEGR1Q7Z3B1 354 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 CLVS1Q8IUQ0 354 aaPredicted RBP2□□□□□ -2.09
SNRNP27-204ENST00000487029 NELFCDQ8IXH7 590 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF645Q8N7E2 425 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 UBL4BQ8N7F7 174 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 DNAAF3Q8N9W5 541 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 GATSQ8NAP1 163 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 OR13G1Q8NGZ3 307 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 TEX47Q8TBZ9 253 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 QKIQ96PU8 341 aaKnown RBP eCLIP2□□□□□ -2.09
SNRNP27-204ENST00000487029 KCNS3Q9BQ31 491 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 CHCHD7Q9BUK0 85 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 EMC6Q9BV81 110 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 OR51B5Q9H339 312 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 TRIM45Q9H8W5 580 aaPredicted RBP2□□□□□ -2.09
SNRNP27-204ENST00000487029 FANCEQ9HB96 536 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 TMBIM4Q9HC24 238 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 LZTFL1Q9NQ48 299 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 FBXO6Q9NRD1 293 aaPredicted RBP2□□□□□ -2.09
SNRNP27-204ENST00000487029 NKIRAS1Q9NYS0 192 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 CES1P1Q9UKY3 287 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 S4R3C0 116 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 ASXL1Q8IXJ9 1541 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 FANCAO15360 1455 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 NRXN1Q9ULB1 1477 aa2□□□□□ -2.09
SNRNP27-204ENST00000487029 CABIN1Q9Y6J0 2220 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 JCADQ9P266 1359 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 MYO3BQ8WXR4 1341 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 NEURL4Q96JN8 1562 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 IGHV3-49A0A0A0MS15 119 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 C1orf232A0A0U1RR37 186 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 A0A1B0GVG6 124 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 A0A1W2PQ67 120 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 FUOMA2VDF0 154 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 C2orf74A8MZ97 194 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 RNF113AO15541 343 aaKnown RBP1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 ZW10O43264 779 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 GATCO43716 136 aaKnown RBP1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 PLIN3O60664 434 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 CCDC22O60826 627 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 SNAI1O95863 264 aaPredicted RBP1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 CALB1P05937 261 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 S100A9P06702 114 aaKnown RBP1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 THRAP10827 490 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 EVI2BP34910 448 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 APLNRP35414 380 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 CFHR2P36980 270 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 HAAOP46952 286 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 SERPINB10P48595 397 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 RAB4BP61018 213 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 NAA20P61599 178 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 RPL10AP62906 217 aaKnown RBP1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 RPL18AQ02543 176 aaKnown RBP1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 COTL1Q14019 142 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 ZNF846Q147U1 533 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 LY6EQ16553 131 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 PRSS8Q16651 343 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 TTMPQ5BVD1 217 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 CLVS2Q5SYC1 327 aa1.99□□□□□ -2.09
SNRNP27-204ENST00000487029 ERICH5Q6P6B1 374 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms