RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 IL24Q13007 206 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 SMIM21Q3B7S5 101 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 CD276Q5ZPR3 534 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 ACP7Q6ZNF0 438 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 SLC25A26Q70HW3 274 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 C1QL2Q7Z5L3 287 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 ANGPTL6Q8NI99 470 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 SGCDQ92629 289 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 MYDGFQ969H8 173 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 RFT1Q96AA3 541 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 SMIM19Q96E16 107 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 OPALINQ96PE5 141 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 GAFA1Q96PS6 74 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 SPACA5Q96QH8 159 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 ZCCHC4Q9H5U6 513 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 RASL12Q9NYN1 266 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 COL6A5A8TX70 2615 aa12.25□□□□□ -0.45
USP4-212ENST00000486549 CUBNO60494 3623 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 IGKV1D-17A0A075B6S4 117 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 OGG1O15527 345 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 SPRY1O43609 319 aaPredicted RBP12.24□□□□□ -0.45
USP4-212ENST00000486549 HCKP08631 526 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 CEBPDP49716 269 aaPredicted RBP12.24□□□□□ -0.45
USP4-212ENST00000486549 WNT4P56705 351 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 IL13RA1P78552 427 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 LRRC10Q5BKY1 277 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 ARMCX4Q5H9R4 360 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 ZNF788Q6ZQV5 615 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 LHFPL2Q6ZUX7 228 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 BTN2A1Q7KYR7 527 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 SERPINA12Q8IW75 414 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 ZNF485Q8NCK3 441 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 DNAAF1Q8NEP3 725 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 OR13C5Q8NGS8 318 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 NANPQ8TBE9 248 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 RPS4Y2Q8TD47 263 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 GPR148Q8TDV2 347 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 H1FXQ92522 213 aaKnown RBP12.24□□□□□ -0.45
USP4-212ENST00000486549 SPSB1Q96BD6 273 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 NRIP2Q9BQI9 281 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 DNTTIP1Q9H147 329 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 PAK1IP1Q9NWT1 392 aaPredicted RBP12.24□□□□□ -0.45
USP4-212ENST00000486549 OR14J1Q9UGF5 321 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 METRNQ9UJH8 293 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 ERGIC3Q9Y282 383 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 ZNF281Q9Y2X9 895 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 TPRKBQ9Y3C4 175 aa12.24□□□□□ -0.45
USP4-212ENST00000486549 KIR2DS1A0A191URI9 304 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 RFPL4AA6NLU0 287 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 RFPL4AL1F8VTS6 287 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 F8VVB4 439 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 F8VWA3 439 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 SULT1B1O43704 296 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 NOS1APO75052 506 aaPredicted RBP12.23□□□□□ -0.45
USP4-212ENST00000486549 CYB5AP00167 134 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 ACAA1P09110 424 aaPredicted RBP12.23□□□□□ -0.45
USP4-212ENST00000486549 NDUFB7P17568 137 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 CAPZA1P52907 286 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 TAS2R43P59537 309 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 PAX8Q06710 450 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 DOC2BQ14184 412 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 DGUOKQ16854 277 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 ATPAF1Q5TC12 328 aaPredicted RBP12.23□□□□□ -0.45
USP4-212ENST00000486549 DMKNQ6E0U4 476 aaPredicted RBP12.23□□□□□ -0.45
USP4-212ENST00000486549 RNF144BQ7Z419 303 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 PARP16Q8N5Y8 322 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 NANOGP1Q8N7R0 232 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 TMEM185AQ8NFB2 350 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 OR5D18Q8NGL1 313 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 OR5D14Q8NGL3 314 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 GHSRQ92847 366 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 TMEM106AQ96A25 262 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 DACT3Q96B18 629 aaPredicted RBP12.23□□□□□ -0.45
USP4-212ENST00000486549 MED30Q96HR3 178 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 CEP19Q96LK0 163 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 ELL3Q9HB65 397 aaPredicted RBP12.23□□□□□ -0.45
USP4-212ENST00000486549 NEK6Q9HC98 313 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 TAS2R4Q9NYW5 299 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 MTCH1Q9NZJ7 389 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 SLC25A10Q9UBX3 287 aaPredicted RBP12.23□□□□□ -0.45
USP4-212ENST00000486549 ZNF222Q9UK12 451 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 RAB26Q9ULW5 256 aa12.23□□□□□ -0.45
USP4-212ENST00000486549 IGHV3OR16-10A0A075B7F0 116 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 SIGLEC5O15389 551 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 RGS9O75916 674 aaPredicted RBP12.22□□□□□ -0.45
USP4-212ENST00000486549 CD2P06729 351 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 RAB3AP20336 220 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 EPHA1P21709 976 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 FGF12P61328 243 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 ERVK11-1P61568 191 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 MKXQ8IYA7 352 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 CD177Q8N6Q3 437 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 PNLDC1Q8NA58 520 aaKnown RBP12.22□□□□□ -0.45
USP4-212ENST00000486549 ZNRF1Q8ND25 227 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 EMG1Q92979 244 aaKnown RBP12.22□□□□□ -0.45
USP4-212ENST00000486549 ORAI1Q96D31 301 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 MND1Q9BWT6 205 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 OCEL1Q9H607 264 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 HES4Q9HCC6 221 aa12.22□□□□□ -0.45
USP4-212ENST00000486549 MAB21L2Q9Y586 359 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms