RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 MS4A18Q3C1V0 323 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 CHRFAM7AQ494W8 412 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 PYY3Q5JQD4 70 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 KRBOX4Q5JUW0 171 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 C9orf50Q5SZB4 431 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 RPUSD3Q6P087 351 aaKnown RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 CRIP3Q6Q6R5 217 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 H1FNTQ75WM6 255 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 RD3Q7Z3Z2 195 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 ZNF761Q86XN6 746 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 LINC00346Q8IVM7 164 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 WDFY1Q8IWB7 410 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 SGPP2Q8IWX5 399 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 FAM24BQ8N5W8 94 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 C12orf76Q8N812 135 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 ZNF565Q8N9K5 539 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 ZNF610Q8N9Z0 462 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 ZNF248Q8NDW4 579 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 CSNK2A3Q8NEV1 391 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 NOXO1Q8NFA2 376 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 SEMA6DQ8NFY4 1073 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 OR8B12Q8NGG6 310 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 OR10G4Q8NGN3 311 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 OR14K1Q8NGZ2 314 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 GTF3AQ92664 365 aaKnown RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 RELTQ969Z4 430 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 CPNE4Q96A23 557 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 MRPL24Q96A35 216 aaKnown RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 ISOC2Q96AB3 205 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 NTNG2Q96CW9 530 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 FBXO17Q96EF6 278 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 MVB12AQ96EY5 273 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 MMABQ96EY8 250 aaPredicted RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 ZDHHC12Q96GR4 267 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 C18orf12Q96KH6 178 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 CAPNS2Q96L46 248 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 C20orf173Q96LM9 149 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 SYT3Q9BQG1 590 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 SUCNR1Q9BXA5 334 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 PECRQ9BY49 303 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 MRPL13Q9BYD1 178 aaKnown RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 PLA2G2FQ9BZM2 168 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 OR11A1Q9GZK7 315 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 WWTR1Q9GZV5 400 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 RAB33BQ9H082 229 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 PRDM13Q9H4Q3 707 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 WFDC1Q9HC57 220 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 PNRC2Q9NPJ4 139 aaKnown RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 SLC2A4RGQ9NR83 387 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 CENPMQ9NSP4 180 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 GAR1Q9NY12 217 aaKnown RBP4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 KIAA1456Q9P272 454 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 ZDHHC8Q9ULC8 765 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 LHFPL6Q9Y693 200 aa4.09□□□□□ -1.75
SMARCC1-206ENST00000485737 IGLV3-32A0A0A0MS00 114 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 IGKV1-9A0A0C4DH69 117 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 A0A0U1RQV5 110 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 A0A1W2PP11 408 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 LIPT2A6NK58 231 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 ZNF726A6NNF4 738 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 C17orf51A8MQB3 221 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 ZNF587BE7ETH6 402 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 H3BMH7 237 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 MKRN2OSH3BPM6 223 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 SDCBPO00560 298 aaPredicted RBP4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 HSD17B6O14756 317 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 TRAF3IP2O43734 574 aaPredicted RBP4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 PRKNO60260 465 aaPredicted RBP4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 MBPP02686 304 aaPredicted RBP4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 HSPB1P04792 205 aaKnown RBP4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 HCKP08631 526 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 SRP19P09132 144 aaKnown RBP4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 DAOP14920 347 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 IL11P20809 199 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 DUSP1P28562 367 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 GPX4P36969 197 aaPredicted RBP4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 CEACAM6P40199 344 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 APOBEC1P41238 236 aaKnown RBP4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 FASLGP48023 281 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 DHPSP49366 369 aaPredicted RBP4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 PPM1FP49593 454 aaPredicted RBP4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 RND2P52198 227 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 UCP3P55916 312 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 PKIAP61925 76 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 GRB2P62993 217 aaKnown RBP4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 SRPXP78539 464 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 DEFA6Q01524 100 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 POU3F1Q03052 451 aaPredicted RBP4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 TLE3Q04726 772 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 ZNF616Q08AN1 781 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 ARFRP1Q13795 201 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 ZNF266Q14584 549 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 TMEM187Q14656 261 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 NUMA1Q14980 2115 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 Q3ZCU0 254 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 LBHQ53QV2 105 aaPredicted RBP4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 SLC25A53Q5H9E4 307 aa4.08□□□□□ -1.76
SMARCC1-206ENST00000485737 C9orf152Q5JTZ5 239 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms