RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 PKIBQ9C010 78 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 OR14J1Q9UGF5 321 aa13.44□□□□□ -0.26
DDR1-246ENST00000485023 SIRT4Q9Y6E7 314 aaPredicted RBP13.44□□□□□ -0.26
DDR1-246ENST00000485023 RFPL4AA6NLU0 287 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 RFPL4AL1F8VTS6 287 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 F8VVB4 439 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 F8VWA3 439 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 SPRY1O43609 319 aaPredicted RBP13.43□□□□□ -0.26
DDR1-246ENST00000485023 MPZP25189 248 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 RBP2P50120 134 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 MTCP1P56278 107 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 MED21Q13503 144 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 ATPAF1Q5TC12 328 aaPredicted RBP13.43□□□□□ -0.26
DDR1-246ENST00000485023 IZUMO2Q6UXV1 221 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 UTS2BQ765I0 119 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 RNF144BQ7Z419 303 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 PNLDC1Q8NA58 520 aaKnown RBP13.43□□□□□ -0.26
DDR1-246ENST00000485023 ZNRF1Q8ND25 227 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 OR5D18Q8NGL1 313 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 FBLIM1Q8WUP2 373 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 OPALINQ96PE5 141 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 MTCH1Q9NZJ7 389 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 ONECUT1Q9UBC0 465 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 SLC25A10Q9UBX3 287 aaPredicted RBP13.43□□□□□ -0.26
DDR1-246ENST00000485023 ZNF69Q9UC07 566 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 PSORS1C1Q9UIG5 152 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 RPUSD1Q9UJJ7 312 aaKnown RBP13.43□□□□□ -0.26
DDR1-246ENST00000485023 ZNF222Q9UK12 451 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 NUP50Q9UKX7 468 aa13.43□□□□□ -0.26
DDR1-246ENST00000485023 SOX21Q9Y651 276 aaPredicted RBP13.43□□□□□ -0.26
DDR1-246ENST00000485023 PNMA8CA0A1B0GUJ8 204 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 ZNF879B4DU55 563 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 SIGLEC5O15389 551 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 ACAA1P09110 424 aaPredicted RBP13.42□□□□□ -0.26
DDR1-246ENST00000485023 CALCBP10092 127 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 PIPP12273 146 aaPredicted RBP13.42□□□□□ -0.26
DDR1-246ENST00000485023 PRKACBP22694 351 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 C21orf33P30042 268 aaPredicted RBP13.42□□□□□ -0.26
DDR1-246ENST00000485023 ATP1B3P54709 279 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 SNU13P55769 128 aaKnown RBP13.42□□□□□ -0.26
DDR1-246ENST00000485023 ARF6P62330 175 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 IL24Q13007 206 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 KRTAP24-1Q3LI83 254 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 RPL22L1Q6P5R6 122 aaKnown RBP13.42□□□□□ -0.26
DDR1-246ENST00000485023 BCL6BQ8N143 479 aaPredicted RBP13.42□□□□□ -0.26
DDR1-246ENST00000485023 CD177Q8N6Q3 437 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 OR13C5Q8NGS8 318 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 OR52N1Q8NH53 320 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 ZNF418Q8TF45 676 aaPredicted RBP13.42□□□□□ -0.26
DDR1-246ENST00000485023 UPRTQ96BW1 309 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 MED30Q96HR3 178 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 CEP19Q96LK0 163 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 DNTTIP1Q9H147 329 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 VCX3BQ9H321 246 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 BABAM2Q9NXR7 383 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 RASL12Q9NYN1 266 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 CNOT2Q9NZN8 540 aaKnown RBP13.42□□□□□ -0.26
DDR1-246ENST00000485023 MAB21L2Q9Y586 359 aa13.42□□□□□ -0.26
DDR1-246ENST00000485023 MXRA5Q9NR99 2828 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 MYL12BO14950 172 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 ANGPTL7O43827 346 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 NOS1APO75052 506 aaPredicted RBP13.41□□□□□ -0.26
DDR1-246ENST00000485023 TOX4O94842 621 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 VENTXO95231 258 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 ATP6V1G2O95670 118 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 ECDO95905 644 aaPredicted RBP13.41□□□□□ -0.26
DDR1-246ENST00000485023 HCKP08631 526 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 PRDX2P32119 198 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 PRB3Q04118 309 aaPredicted RBP13.41□□□□□ -0.26
DDR1-246ENST00000485023 CCDC58Q4VC31 144 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 METTL11BQ5VVY1 283 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 BRD3OSQ6XYD6 125 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 LHFPL2Q6ZUX7 228 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 EGFL6Q8IUX8 553 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 DNAAF1Q8NEP3 725 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 HAVCR2Q8TDQ0 301 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 EMG1Q92979 244 aaKnown RBP13.41□□□□□ -0.26
DDR1-246ENST00000485023 SPSB1Q96BD6 273 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 TBX15Q96SF7 602 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 MS4A7Q9GZW8 240 aaPredicted RBP13.41□□□□□ -0.26
DDR1-246ENST00000485023 ZCCHC4Q9H5U6 513 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 NEK6Q9HC98 313 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 HES4Q9HCC6 221 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 PLCXD1Q9NUJ7 323 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 TAS2R4Q9NYW5 299 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 IL36RNQ9UBH0 155 aa13.41□□□□□ -0.26
DDR1-246ENST00000485023 FBN1P35555 2871 aaKnown RBP13.41□□□□□ -0.26
DDR1-246ENST00000485023 A0A1W2PQ09 198 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 PTGES3LE9PB15 166 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 H0YJX3 145 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 SLC1A7O00341 560 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 RPSAP08865 295 aaKnown RBP13.4□□□□□ -0.26
DDR1-246ENST00000485023 PPIAL4GP0DN37 164 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 BCL3P20749 454 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 FPR2P25090 351 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 NPBWR2P48146 333 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 ERVK11-1P61568 191 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 DOC2BQ14184 412 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 C6orf141Q5SZD1 244 aa13.4□□□□□ -0.26
DDR1-246ENST00000485023 RUSC1-AS1Q66K80 236 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms