RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 INMTO95050 263 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 NRASP01111 189 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 IGLL1P15814 213 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 PRKACGP22612 351 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 CBX1P83916 185 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 RIPPLY1Q0D2K3 151 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 CNN3Q15417 329 aaKnown RBP11.21□□□□□ -0.61
VARS-226ENST00000483275 ZNF684Q5T5D7 378 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 C1orf146Q5VVC0 180 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 REC114Q7Z4M0 266 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 ZNF561Q8N587 486 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 ASCC1Q8N9N2 400 aaKnown RBP11.21□□□□□ -0.61
VARS-226ENST00000483275 OR4S1Q8NGB4 309 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 OR5A2Q8NGI9 324 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 TRMT10AQ8TBZ6 339 aaKnown RBP11.21□□□□□ -0.61
VARS-226ENST00000483275 NRIP2Q9BQI9 281 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 NECAP2Q9NVZ3 263 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 ENPP5Q9UJA9 477 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 IKZF2Q9UKS7 526 aa11.21□□□□□ -0.61
VARS-226ENST00000483275 TCRBV3S1A0A5B6 114 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 PQLC2LA1A4F0 135 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 FAM90A8PA6NJQ4 464 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 ODF3BA8MYP8 253 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 F8VVB4 439 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 F8VWA3 439 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 FKBP6O75344 327 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 MPIG6BO95866 241 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 IGLV3-1P01715 115 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 TTRP02766 147 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 TK1P04183 234 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 EDDM3BP56851 147 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 BLCAPP62952 87 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 COL10A1Q03692 680 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 DYNC1I2Q13409 638 aaKnown RBP11.2□□□□□ -0.62
VARS-226ENST00000483275 FOXB2Q5VYV0 432 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 LIAT1Q6ZQX7 453 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 TCF23Q7RTU1 214 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 BCDIN3DQ7Z5W3 292 aaKnown RBP11.2□□□□□ -0.62
VARS-226ENST00000483275 ANGPTL5Q86XS5 388 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 CALHM1Q8IU99 346 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 Q8N2B8 174 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 RPS4Y2Q8TD47 263 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 WIPF2Q8TF74 440 aaPredicted RBP11.2□□□□□ -0.62
VARS-226ENST00000483275 ZNF556Q9HAH1 456 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 ABCB10Q9NRK6 738 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 RASL12Q9NYN1 266 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 HILPDAQ9Y5L2 63 aa11.2□□□□□ -0.62
VARS-226ENST00000483275 A0A1W2PPH5 198 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 VGLL3A8MV65 326 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 F2RL2O00254 374 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 EBAG9O00559 213 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 XPNPEP2O43895 674 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 PEX14O75381 377 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 DHRS3O75911 302 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 OSMP13725 252 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 CDK5Q00535 292 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 EDDM3AQ14507 147 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 ODF4Q2M2E3 257 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 KIAA2026Q5HYC2 2103 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 SLC35D3Q5M8T2 416 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 C11orf87Q6NUJ2 197 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 NDUFA11Q86Y39 141 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 TPRX1Q8N7U7 411 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 APOL4Q9BPW4 351 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 YIPF3Q9GZM5 350 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 IL36RNQ9UBH0 155 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 DNAJB9Q9UBS3 223 aa11.19□□□□□ -0.62
VARS-226ENST00000483275 NUFIP1Q9UHK0 495 aaKnown RBP11.19□□□□□ -0.62
VARS-226ENST00000483275 hCG_1809904A0A1W2PP81 198 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 A0A1W2PPE2 198 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 A0A1W2PR64 198 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 A0A1W2PRV1 198 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 ARRDC5A6NEK1 342 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 C17orf98A8MV24 154 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 SRSF10O75494 262 aaKnown RBP11.18□□□□□ -0.62
VARS-226ENST00000483275 CD24P25063 80 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 VDAC2P45880 294 aaPredicted RBP11.18□□□□□ -0.62
VARS-226ENST00000483275 RIDAP52758 137 aaKnown RBP11.18□□□□□ -0.62
VARS-226ENST00000483275 ZNF829Q3KNS6 432 aaPredicted RBP11.18□□□□□ -0.62
VARS-226ENST00000483275 CLVS2Q5SYC1 327 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 BCL2L15Q5TBC7 163 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 KCTD18Q6PI47 426 aaPredicted RBP11.18□□□□□ -0.62
VARS-226ENST00000483275 KRT74Q7RTS7 529 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 OR4F17Q8NGA8 305 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 SLAMF9Q96A28 289 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 FOXRED1Q96CU9 486 aaPredicted RBP11.18□□□□□ -0.62
VARS-226ENST00000483275 OR4F4Q96R69 305 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 MROQ9BYG7 248 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 PRSS22Q9GZN4 317 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 WNT10AQ9GZT5 417 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 HES4Q9HCC6 221 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 TVP23BQ9NYZ1 205 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 SLC22A13Q9Y226 551 aa11.18□□□□□ -0.62
VARS-226ENST00000483275 A0A1B0GTI1 187 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 FAM230AA0A1W2PPH8 454 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 SH2D7A6NKC9 451 aaPredicted RBP11.17□□□□□ -0.62
VARS-226ENST00000483275 LOC110117498-PIK3R3F6TDL0 507 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 K7N7A8 449 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 PRKYO43930 277 aa11.17□□□□□ -0.62
VARS-226ENST00000483275 ZNF737O75373 536 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms