RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 H3BN98 237 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 J3QT63 122 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 ZNF737O75373 536 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 AMY1AP04745 511 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 AMY2AP04746 511 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 ZNF728P0DKX0 622 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 GDNFP39905 211 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 MICAQ29983 383 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 TMEM236Q5W0B7 351 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 KRT77Q7Z794 578 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 CPOQ8IVL8 374 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 MRPL41Q8IXM3 137 aaKnown RBP9.54□□□□□ -0.88
HDAC6-219ENST00000476625 OR10G2Q8NGC3 310 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 OR11H6Q8NGC7 330 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 OR13D1Q8NGV5 346 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 NDNFQ8TB73 568 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 TEX47Q8TBZ9 253 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 FOXRED1Q96CU9 486 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-219ENST00000476625 DGCR6LQ9BY27 220 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 CHST6Q9GZX3 395 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 CCDC134Q9H6E4 229 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 HES4Q9HCC6 221 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 ARL8BQ9NVJ2 186 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 ZNF446Q9NWS9 450 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 RASL12Q9NYN1 266 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 SLC22A13Q9Y226 551 aa9.54□□□□□ -0.88
HDAC6-219ENST00000476625 SAMHD1Q9Y3Z3 626 aaKnown RBP9.54□□□□□ -0.88
HDAC6-219ENST00000476625 TSSC4Q9Y5U2 329 aaPredicted RBP9.54□□□□□ -0.88
HDAC6-219ENST00000476625 EPPK1P58107 5090 aaKnown RBP9.54□□□□□ -0.88
HDAC6-219ENST00000476625 IGHV2-26A0A0B4J1V2 119 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 TMEM269A0A1B0GVZ9 245 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 A0A1W2PPH5 198 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 PQLC2LA1A4F0 135 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 OR5B21A6NL26 309 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 K7N7A8 449 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 KRT36O76013 467 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 NRASP01111 189 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 IGHA1P01876 353 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 TTRP02766 147 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 ALOX5APP20292 161 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 SLC2A5P22732 501 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 MAGEA2P43356 314 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 BLVRAP53004 296 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 SNU13P55769 128 aaKnown RBP9.53□□□□□ -0.88
HDAC6-219ENST00000476625 OR12D2P58182 307 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 GINS1Q14691 196 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 SNCBQ16143 134 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 C9orf152Q5JTZ5 239 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 NKAPLQ5M9Q1 402 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 LCN8Q6JVE9 175 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 HS3ST5Q8IZT8 346 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 ZNF676Q8N7Q3 588 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 OR52N4Q8NGI2 321 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 OR4P4Q8NGL7 312 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 SLAMF9Q96A28 289 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 CMTM5Q96DZ9 223 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 RCC1LQ96I51 464 aaKnown RBP9.53□□□□□ -0.88
HDAC6-219ENST00000476625 FEVQ99581 238 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 ASCL2Q99929 193 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 FAM107BQ9H098 131 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 PITPNC1Q9UKF7 332 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 GTF2A1LQ9UNN4 478 aa9.53□□□□□ -0.88
HDAC6-219ENST00000476625 IGKV1-27A0A075B6S5 117 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 CCDC182A6NF36 153 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 FAM90A22PA8MWA6 464 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 PRR23D1E9PI22 279 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-219ENST00000476625 M0R129 80 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 SNRNP70P08621 437 aaKnown RBP9.52□□□□□ -0.89
HDAC6-219ENST00000476625 PRR23D2P0DMB1 279 aaPredicted RBP9.52□□□□□ -0.89
HDAC6-219ENST00000476625 PAICSP22234 425 aaKnown RBP9.52□□□□□ -0.89
HDAC6-219ENST00000476625 DUSP1P28562 367 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 ERVK11-1P61568 191 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 RPS7P62081 194 aaKnown RBP9.52□□□□□ -0.89
HDAC6-219ENST00000476625 ESRRGP62508 458 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 RIPPLY1Q0D2K3 151 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 APOFQ13790 326 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 ODF4Q2M2E3 257 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 ZNF684Q5T5D7 378 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 PRAMEF5Q5TYX0 476 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 C8orf86Q6ZUL3 223 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 KRT74Q7RTS7 529 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 RNF144BQ7Z419 303 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 BCDIN3DQ7Z5W3 292 aaKnown RBP9.52□□□□□ -0.89
HDAC6-219ENST00000476625 ZNF329Q86UD4 541 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 DEFB107AQ8IZN7 70 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 PGAM4Q8N0Y7 254 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 TFAP2CQ92754 450 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 ZNF714Q96N38 554 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 SLC25A33Q9BSK2 321 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 CADM1Q9BY67 442 aaKnown RBP9.52□□□□□ -0.89
HDAC6-219ENST00000476625 MTCH1Q9NZJ7 389 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 LINC00527Q9UJ94 153 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 ENPP5Q9UJA9 477 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 LAMP5Q9UJQ1 280 aa9.52□□□□□ -0.89
HDAC6-219ENST00000476625 A0A0U1RQV5 110 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 A0A1B0GTI1 187 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 hCG_1809904A0A1W2PP81 198 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 A0A1W2PPE2 198 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 FAM230AA0A1W2PPH8 454 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 A0A1W2PR64 198 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms