RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 CLDN34H7C241 214 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 CTDSP2O14595 271 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 PLATP00750 562 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 KRT8P05787 483 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 GRPP07492 148 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 CFHR2P36980 270 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 DOC2BQ14184 412 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 OR8B8Q15620 311 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 TEX36Q5VZQ5 186 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 SFRP4Q6FHJ7 346 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-211ENST00000471260 FAM57BQ71RH2 274 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 SPATC1Q76KD6 591 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 LAX1Q8IWV1 398 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 OR8H2Q8N162 312 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 C3orf56Q8N813 242 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 KAAG1Q9UBP8 84 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 ZNF221Q9UK13 617 aa11.23□□□□□ -0.61
HMGN1-211ENST00000471260 A6NLC8 198 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 ECDO95905 644 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-211ENST00000471260 MUC1P15941 1255 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-211ENST00000471260 GNALP38405 381 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 GSK3AP49840 483 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 POU4F2Q12837 409 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 FOXL1Q12952 345 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 KLHL12Q53G59 568 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 DEGS2Q6QHC5 323 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 CPOQ8IVL8 374 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 BCL6BQ8N143 479 aaPredicted RBP11.22□□□□□ -0.61
HMGN1-211ENST00000471260 GCSAMQ8N6F7 178 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 THEM6Q8WUY1 208 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 SLC25A28Q96A46 364 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 PGAM5Q96HS1 289 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 DMRTB1Q96MA1 342 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 AMELYQ99218 206 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 MPC1Q9Y5U8 109 aa11.22□□□□□ -0.61
HMGN1-211ENST00000471260 hCG_1807616A0A1W2PRN6 198 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 ANKRD61A6NGH8 418 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 ACOD1A6NK06 481 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 SLC22A31A6NKX4 558 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 ANXA2P2A6NMY6 339 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 C3orf80F5H4A9 247 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 ADAM20O43506 726 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 CCNKO75909 580 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 RNASE1P07998 156 aaKnown RBP11.21□□□□□ -0.61
HMGN1-211ENST00000471260 IGHV4-38-2P0DP08 117 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 HKR1P10072 659 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 SLC2A5P22732 501 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 NAA10P41227 235 aaPredicted RBP11.21□□□□□ -0.61
HMGN1-211ENST00000471260 MTNR1BP49286 362 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 RPS25P62851 125 aaKnown RBP11.21□□□□□ -0.61
HMGN1-211ENST00000471260 ACTC1P68032 377 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 ACTA1P68133 377 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 BAMBIQ13145 260 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 MICBQ29980 383 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 AWAT1Q58HT5 328 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 GPR157Q5UAW9 335 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 LCN1P1Q5VSP4 162 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 HACD4Q5VWC8 232 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 C22orf42Q6IC83 251 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 KCTD18Q6PI47 426 aaPredicted RBP11.21□□□□□ -0.61
HMGN1-211ENST00000471260 FAM131AQ6UXB0 335 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 ZNF826PQ6ZT77 177 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 C11orf53Q8IXP5 236 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 BOLLQ8N9W6 283 aaKnown RBP11.21□□□□□ -0.61
HMGN1-211ENST00000471260 PNLDC1Q8NA58 520 aaKnown RBP11.21□□□□□ -0.61
HMGN1-211ENST00000471260 C19orf18Q8NEA5 215 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 OR1M1Q8NGA1 313 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 TECTBQ96PL2 329 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 MICU1Q9BPX6 476 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 TLNRD1Q9H1K6 362 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 MIXL1Q9H2W2 232 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 PRDM13Q9H4Q3 707 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 ERVK13-1Q9NX77 482 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 H2AFY2Q9P0M6 372 aaPredicted RBP11.21□□□□□ -0.61
HMGN1-211ENST00000471260 ZNF319Q9P2F9 582 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 CTSZQ9UBR2 303 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 LAMP5Q9UJQ1 280 aa11.21□□□□□ -0.61
HMGN1-211ENST00000471260 TRAV40A0A0B4J280 105 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 A0A1W2PQ09 198 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 A0A1W2PQL4 384 aaPredicted RBP11.2□□□□□ -0.62
HMGN1-211ENST00000471260 FAM172BPA6NC97 362 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 FABP12A6NFH5 140 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 DNAJC9-AS1A6NH13 148 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 HMX3A6NHT5 357 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 TMEM210A6NLX4 147 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 ZNF879B4DU55 563 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 C22orf46C9J442 243 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 J3QRE1 110 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 P2RY10O00398 339 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 GPR37O15354 613 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 SELENOFO60613 162 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 TMEM127O75204 238 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 CST4P01036 141 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 SPNP16150 400 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 ALOX5APP20292 161 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 DCTDP32321 178 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 PSMA6P60900 246 aaKnown RBP11.2□□□□□ -0.62
HMGN1-211ENST00000471260 FGF12P61328 243 aa11.2□□□□□ -0.62
HMGN1-211ENST00000471260 RPS7P62081 194 aaKnown RBP11.2□□□□□ -0.62
HMGN1-211ENST00000471260 RSBN1Q5VWQ0 802 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms