RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ERVFRD-1P60508 538 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 EFNB1P98172 346 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 AADACL4Q5VUY2 407 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 SLX4IPQ5VYV7 408 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 Q6ZSR3 168 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 BCDIN3DQ7Z5W3 292 aaKnown RBP14.2□□□□□ -0.14
COL7A1-208ENST00000470076 TCEANCQ8N8B7 351 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 OR4M1Q8NGD0 313 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 TMEM163Q8TC26 289 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 NPFFR1Q9GZQ6 430 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 KRT84Q9NSB2 600 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 OR14J1Q9UGF5 321 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 SIGLEC9Q9Y336 463 aa14.2□□□□□ -0.14
COL7A1-208ENST00000470076 MAGEB4O15481 346 aaPredicted RBP14.19□□□□□ -0.14
COL7A1-208ENST00000470076 DNAJC8O75937 253 aaPredicted RBP14.19□□□□□ -0.14
COL7A1-208ENST00000470076 CCL3L1P16619 93 aa14.19□□□□□ -0.14
COL7A1-208ENST00000470076 ERVK11-1P61568 191 aa14.19□□□□□ -0.14
COL7A1-208ENST00000470076 GID4Q8IVV7 300 aa14.19□□□□□ -0.14
COL7A1-208ENST00000470076 SLC7A6OSQ96CW6 309 aaPredicted RBP14.19□□□□□ -0.14
COL7A1-208ENST00000470076 PKIBQ9C010 78 aa14.19□□□□□ -0.14
COL7A1-208ENST00000470076 MRM2Q9UI43 246 aaKnown RBP14.19□□□□□ -0.14
COL7A1-208ENST00000470076 DSCAML1Q8TD84 2053 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 ZAR1LA6NP61 321 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 K7N7A8 449 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 M0R129 80 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 CCL1P22362 96 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 COX7A1P24310 79 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 PAX6P26367 422 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 BMXP51813 675 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 IL24Q13007 206 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 ZNF273Q14593 569 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 C12orf73Q69YU5 71 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 PLEKHG7Q6ZR37 379 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 C1QL4Q86Z23 238 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 KLHDC1Q8N7A1 406 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 PIFOQ8TCI5 191 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 CFHR4Q92496 578 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 ENOPH1Q9UHY7 261 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 SLC7A11Q9UPY5 501 aa14.18□□□□□ -0.14
COL7A1-208ENST00000470076 A6NIN4 97 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 FAM90A8PA6NJQ4 464 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 C17orf98A8MV24 154 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 VGLL3A8MV65 326 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 G3V2T6 193 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 CHST1O43916 411 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 MITFO75030 526 aaPredicted RBP14.17□□□□□ -0.14
COL7A1-208ENST00000470076 KRT8P05787 483 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 EPHA2P29317 976 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 ZNF782Q6ZMW2 699 aaPredicted RBP14.17□□□□□ -0.14
COL7A1-208ENST00000470076 ANGPTL5Q86XS5 388 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 BATF2Q8N1L9 274 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 ASCC1Q8N9N2 400 aaKnown RBP14.17□□□□□ -0.14
COL7A1-208ENST00000470076 IL4I1Q96RQ9 567 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 CDCA4Q9BXL8 241 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 PLEKHA1Q9HB21 404 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 FOXJ3Q9UPW0 622 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 SLC22A13Q9Y226 551 aa14.17□□□□□ -0.14
COL7A1-208ENST00000470076 TBL2Q9Y4P3 447 aaKnown RBP14.17□□□□□ -0.14
COL7A1-208ENST00000470076 PLXNB1O43157 2135 aa14.16□□□□□ -0.14
COL7A1-208ENST00000470076 RBP4P02753 201 aa14.16□□□□□ -0.14
COL7A1-208ENST00000470076 OPN1MWP04001 364 aa14.16□□□□□ -0.14
COL7A1-208ENST00000470076 CHRM2P08172 466 aa14.16□□□□□ -0.14
COL7A1-208ENST00000470076 OPN1MW2P0DN77 364 aa14.16□□□□□ -0.14
COL7A1-208ENST00000470076 OPN1MW3P0DN78 364 aa14.16□□□□□ -0.14
COL7A1-208ENST00000470076 PIPP12273 146 aaPredicted RBP14.16□□□□□ -0.14
COL7A1-208ENST00000470076 DLX6P56179 175 aa14.16□□□□□ -0.14
COL7A1-208ENST00000470076 COL10A1Q03692 680 aa14.16□□□□□ -0.14
COL7A1-208ENST00000470076 ATP6AP1Q15904 470 aa14.16□□□□□ -0.14
COL7A1-208ENST00000470076 KDM4DQ6B0I6 523 aa14.16□□□□□ -0.14
COL7A1-208ENST00000470076 LHFPL4Q7Z7J7 247 aa14.16□□□□□ -0.14
COL7A1-208ENST00000470076 YIPF7Q8N8F6 280 aa14.16□□□□□ -0.14
COL7A1-208ENST00000470076 OR13D1Q8NGV5 346 aa14.16□□□□□ -0.14
COL7A1-208ENST00000470076 TRMT10AQ8TBZ6 339 aaKnown RBP14.16□□□□□ -0.14
COL7A1-208ENST00000470076 FOXRED1Q96CU9 486 aaPredicted RBP14.16□□□□□ -0.14
COL7A1-208ENST00000470076 WARS2Q9UGM6 360 aaKnown RBP14.16□□□□□ -0.14
COL7A1-208ENST00000470076 FAM230AA0A1W2PPH8 454 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 SYT7O43581 403 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 ZNF737O75373 536 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 GATBO75879 557 aaKnown RBP14.15□□□□□ -0.14
COL7A1-208ENST00000470076 RPP14O95059 124 aaKnown RBP14.15□□□□□ -0.14
COL7A1-208ENST00000470076 ZNF728P0DKX0 622 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 GDPD3Q7L5L3 318 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 SSX6Q7RTT6 188 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 CATSPERDQ86XM0 798 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 ZDHHC13Q8IUH4 622 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 C11orf44Q8N8P7 122 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 CCDC54Q8NEL0 328 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 BCAS4Q8TDM0 211 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 MALSU1Q96EH3 234 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 CEP19Q96LK0 163 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 GABARAPL1Q9H0R8 117 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 TCF19Q9Y242 345 aa14.15□□□□□ -0.14
COL7A1-208ENST00000470076 NOTCH3Q9UM47 2321 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 MEGF11A6BM72 1044 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 ODF3BA8MYP8 253 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 SULT1C4O75897 302 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 ARG1P05089 322 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 OR2T7P0C7T2 308 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 VSIG10L2P0DP72 767 aa14.14□□□□□ -0.15
COL7A1-208ENST00000470076 FUT6P51993 359 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms