RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 OR2I1PQ8NGU4 316 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 OR8S1Q8NH09 359 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 SCAMP5Q8TAC9 235 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 FNDC9Q8TBE3 224 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 RNF128Q8TEB7 428 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 TMEM239Q8WW34 195 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 C11orf40Q8WZ69 217 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 FAM46BQ96A09 425 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 SLAMF6Q96DU3 332 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 OR10C1Q96KK4 312 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 MRGPRX1Q96LB2 322 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 JSRP1Q96MG2 331 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-207ENST00000468925 SPATA33Q96N06 139 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 FOXN4Q96NZ1 517 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 MS4A10Q96PG2 267 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 TBX5Q99593 518 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 GFI1Q99684 422 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 MCHR1Q99705 422 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 GABRG3Q99928 467 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 C20orf24Q9BUV8 137 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 GLIS2Q9BZE0 524 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-207ENST00000468925 NMNAT2Q9BZQ4 307 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 TMEM9BQ9NQ34 198 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 GPR84Q9NQS5 396 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 DECR2Q9NUI1 292 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 ANKRD10Q9NXR5 420 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 CISD1Q9NZ45 108 aaKnown RBP4.28□□□□□ -1.72
SF3B1-207ENST00000468925 FLRT3Q9NZU0 649 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 CNIH4Q9P003 139 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 TAAR2Q9P1P5 351 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 FBXL17Q9UF56 701 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 NAT8Q9UHE5 227 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 SMPXQ9UHP9 88 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 TBX21Q9UL17 535 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 ANAPC10Q9UM13 185 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 GPR132Q9UNW8 380 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 VSIG4Q9Y279 399 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 RBM7Q9Y580 266 aaKnown RBP4.28□□□□□ -1.72
SF3B1-207ENST00000468925 PLXNB2O15031 1838 aa4.28□□□□□ -1.72
SF3B1-207ENST00000468925 UBR3Q6ZT12 1888 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 IGHV1-69-2A0A0G2JMI3 117 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 SERPINE3A8MV23 424 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF732B4DXR9 585 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 NPIPA7E9PJI5 369 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 H0YIZ8 118 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 H0YL77 283 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 TRAPPC2LH3BP13 241 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 CCL25O15444 150 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF264O43296 627 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ADAM20O43506 726 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 TRAF3IP2O43734 574 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 SOX15O60248 233 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 FCMRO60667 390 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 CTSVO60911 334 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 CA11O75493 328 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 NDUFB2O95178 105 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 VENTXO95231 258 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 IGLV3-27P01718 113 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 DBIP07108 87 aaKnown RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 SLC35E2P0CK97 266 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 PRSS56P0CW18 603 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 GIMD1P0DJR0 217 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 NPIPA8P0DM63 369 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ST6GAL1P15907 406 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 AKR1C4P17516 323 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 TCN2P20062 427 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 SFTPDP35247 375 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 APLNRP35414 380 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 TSFMP43897 325 aaKnown RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 CDC34P49427 236 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 CRYBB1P53674 252 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ZXDBP98169 803 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 BAXQ07812 192 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 C17orf67Q0P5P2 114 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 PMPCAQ10713 525 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 RAB32Q13637 225 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ENDOGQ14249 297 aaKnown RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 FZD2Q14332 565 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 GNMTQ14749 295 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 TGIF1Q15583 401 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 EXT1Q16394 746 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 RNF151Q2KHN1 245 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 TP53I3Q53FA7 332 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ALG10Q5BKT4 473 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 C1orf100Q5SVJ3 147 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 PRAMEF14Q5SWL7 426 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF684Q5T5D7 378 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 SLC8B1Q6J4K2 584 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 WDR74Q6RFH5 385 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 COLCA1Q6ZS62 124 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ABHD12BQ7Z5M8 362 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 LHFPL4Q7Z7J7 247 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 RBM45Q8IUH3 476 aaKnown RBP4.27□□□□□ -1.73
SF3B1-207ENST00000468925 BATF2Q8N1L9 274 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 TMEM156Q8N614 296 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 CLDN19Q8N6F1 224 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF676Q8N7Q3 588 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 AMER3Q8N944 861 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 OR5AK3PQ8NH89 298 aa4.27□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF563Q8TA94 476 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms