RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 ATG2BQ96BY7 2078 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 TRAV1-1A0A0B4J248 108 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 IGHV5-51A0A0C4DH38 117 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 B4DGG1 531 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 ZNF587BE7ETH6 402 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 TRAF3IP2O43734 574 aaPredicted RBP13.6□□□□□ -0.23
CHD1L-205ENST00000467213 PTBP3O95758 552 aaKnown RBP13.6□□□□□ -0.23
CHD1L-205ENST00000467213 THEGLP0DJG4 465 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 CEACAM6P40199 344 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 PKIAP61925 76 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 HIST1H3AP68431 136 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 GNMTQ14749 295 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 OR8B8Q15620 311 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 UBE2V2Q15819 145 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 Q3ZCU0 254 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 C1QL2Q7Z5L3 287 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 FBXL14Q8N1E6 418 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 D2HGDHQ8N465 521 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 CCDC71LQ8N9Z2 235 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 MAFIPQ8WZ33 124 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 SLAMF9Q96A28 289 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 RAB39BQ96DA2 213 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 TVP23CQ96ET8 276 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 FAM86C1Q9NVL1 165 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 SOHLH2Q9NX45 425 aa13.6□□□□□ -0.23
CHD1L-205ENST00000467213 DUXBA0A1W2PPF3 345 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 HSPA12AO43301 675 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 YIF1AO95070 293 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 HBE1P02100 147 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 OR13C7P0DN81 318 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 OTX1P32242 354 aaPredicted RBP13.59□□□□□ -0.23
CHD1L-205ENST00000467213 PPP1CCP36873 323 aaKnown RBP13.59□□□□□ -0.23
CHD1L-205ENST00000467213 FHITP49789 147 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 EFNA3P52797 238 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 SLC22A25Q6T423 547 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 FBXW12Q6X9E4 464 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 HIST3H2BBQ8N257 126 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 ZNF383Q8NA42 475 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 OR5R1Q8NH85 324 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 AKR7LQ8NHP1 331 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 SPSB1Q96BD6 273 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 SOX7Q9BT81 388 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 PLEKHJ1Q9NW61 149 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 STMND1H3BQB6 276 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 OR5AC1P0C628 307 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 RND2P52198 227 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 EWSR1Q01844 656 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHD1L-205ENST00000467213 NSDHLQ15738 373 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 TMEM176BQ3YBM2 270 aaPredicted RBP13.59□□□□□ -0.23
CHD1L-205ENST00000467213 ABCA11PQ4W5N1 156 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 KHDC3LQ587J8 217 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 FAM57BQ71RH2 274 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 ZNF283Q8N7M2 679 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 OR14L1PQ8NHC6 308 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 FAM213BQ8TBF2 198 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 LYZL4Q96KX0 146 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 OXGR1Q96P68 337 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 SLC25A31Q9H0C2 315 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 SH3BGRL3Q9H299 93 aa13.59□□□□□ -0.23
CHD1L-205ENST00000467213 ZNF701Q9NV72 531 aaPredicted RBP13.59□□□□□ -0.23
CHD1L-205ENST00000467213 FAM230AA0A1W2PPH8 454 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 CLEC18AA5D8T8 446 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 HIST1H2BKO60814 126 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 NDUFS6O75380 124 aaKnown RBP13.58□□□□□ -0.24
CHD1L-205ENST00000467213 SCGB1D2O95969 90 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 HIST1H2BJP06899 126 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 HIST1H2BOP23527 126 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 HIST1H2BBP33778 126 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 HIST1H2BDP58876 126 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 HIST1H2BCP62807 126 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 BAXQ07812 192 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 PNRC1Q12796 327 aaPredicted RBP13.58□□□□□ -0.24
CHD1L-205ENST00000467213 HIST2H2BEQ16778 126 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.58□□□□□ -0.24
CHD1L-205ENST00000467213 LCN10Q6JVE6 187 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 TTLL10Q6ZVT0 673 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 CLEC18CQ8NCF0 446 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 Q8WTZ3 238 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 HIST1H2BHQ93079 126 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 MOB3AQ96BX8 217 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 C14orf144Q96I85 54 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 HIST1H2BNQ99877 126 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 HIST1H2BMQ99879 126 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 NELFAQ9H3P2 528 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 SDHAF3Q9NRP4 125 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 PUS1Q9Y606 427 aaKnown RBP eCLIP13.58□□□□□ -0.24
CHD1L-205ENST00000467213 PPP1R2P9O14990 202 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 ST8SIA5O15466 376 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 HEXBP07686 556 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 FBLP22087 321 aaKnown RBP13.58□□□□□ -0.24
CHD1L-205ENST00000467213 TAGLN2P37802 199 aaKnown RBP13.58□□□□□ -0.24
CHD1L-205ENST00000467213 RNF4P78317 190 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 OR2C3Q8N628 320 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 PARP12Q9H0J9 701 aaKnown RBP13.58□□□□□ -0.24
CHD1L-205ENST00000467213 PLSCR2Q9NRY7 297 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 B3GALT1Q9Y5Z6 326 aa13.58□□□□□ -0.24
CHD1L-205ENST00000467213 ARGFXA6NJG6 315 aa13.57□□□□□ -0.24
CHD1L-205ENST00000467213 TERTO14746 1132 aaKnown RBP13.57□□□□□ -0.24
CHD1L-205ENST00000467213 CSNK1A1P48729 337 aa13.57□□□□□ -0.24
CHD1L-205ENST00000467213 NDUFA6P56556 154 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 455.8 ms