RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CCDC120Q96HB5 630 aa7.67□□□□□ -1.18
VPS50-207ENST00000458530 OR51B6Q9H340 312 aa7.67□□□□□ -1.18
VPS50-207ENST00000458530 RHOFQ9HBH0 211 aa7.67□□□□□ -1.18
VPS50-207ENST00000458530 RBFOX1Q9NWB1 397 aaKnown RBP7.67□□□□□ -1.18
VPS50-207ENST00000458530 ZNF107Q9UII5 783 aaPredicted RBP7.67□□□□□ -1.18
VPS50-207ENST00000458530 ITGB1BP2Q9UKP3 347 aa7.67□□□□□ -1.18
VPS50-207ENST00000458530 TBC1D24Q9ULP9 559 aa7.67□□□□□ -1.18
VPS50-207ENST00000458530 FAM240BA0A1B0GVZ2 78 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 PQLC2LA1A4F0 135 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 TMEM210A6NLX4 147 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 CCL21O00585 134 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 TPD52L2O43399 206 aaKnown RBP7.66□□□□□ -1.18
VPS50-207ENST00000458530 TIMM8AO60220 97 aaPredicted RBP7.66□□□□□ -1.18
VPS50-207ENST00000458530 COX6B1P14854 86 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 MGMTP16455 207 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 SERPINA2P20848 420 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 AGAP20933 346 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 KITLGP21583 273 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 PTAFRP25105 342 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 GDNFP39905 211 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 CBX5P45973 191 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 ZP1P60852 638 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 RPS27AP62979 156 aaKnown RBP7.66□□□□□ -1.18
VPS50-207ENST00000458530 PDZK1IP1Q13113 114 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 UNC119Q13432 240 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 PNLIPRP3Q17RR3 467 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 MBNL2Q5VZF2 373 aaKnown RBP7.66□□□□□ -1.18
VPS50-207ENST00000458530 RGS7BPQ6MZT1 257 aaPredicted RBP7.66□□□□□ -1.18
VPS50-207ENST00000458530 ASCL4Q6XD76 172 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 MYPOPQ86VE0 399 aaPredicted RBP7.66□□□□□ -1.18
VPS50-207ENST00000458530 RELL2Q8NC24 303 aaPredicted RBP7.66□□□□□ -1.18
VPS50-207ENST00000458530 CHST4Q8NCG5 386 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 OR51T1Q8NGJ9 327 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 OR5D18Q8NGL1 313 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 OR10R2Q8NGX6 335 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 RAB3CQ96E17 227 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 ZC3HAV1LQ96H79 300 aaKnown RBP7.66□□□□□ -1.18
VPS50-207ENST00000458530 RNF170Q96K19 258 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 TM2D1Q9BX74 207 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 C1QTNF6Q9BXI9 259 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 PKIBQ9C010 78 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 OR2J1Q9GZK6 312 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 KCNK15Q9H427 330 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 PLK3Q9H4B4 646 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 AUNIPQ9H7T9 357 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 GPR160Q9UJ42 338 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 POLDIP2Q9Y2S7 368 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 RBMX2Q9Y388 322 aaKnown RBP7.66□□□□□ -1.18
VPS50-207ENST00000458530 CACNG2Q9Y698 323 aa7.66□□□□□ -1.18
VPS50-207ENST00000458530 NSD1Q96L73 2696 aaPredicted RBP7.65□□□□□ -1.18
VPS50-207ENST00000458530 LINC00854A0A1B0GVQ3 168 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM221AA4D161 298 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 LRP5LA4QPB2 252 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A10PA6NDY2 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A18PA6NE21 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A16PA6NEW6 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A20PA6NIJ5 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A8PA6NJQ4 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A7PA6NKC0 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 SERPINE3A8MV23 424 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A22PA8MWA6 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A12PA8MX19 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A5PA8MXJ8 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 VSTM5A8MXK1 200 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A23PA8MXZ1 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 ZNF732B4DXR9 585 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 TRAPPC2LH3BP13 241 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 H7C417 338 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 AKR7A2O43488 359 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 CA11O75493 328 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 HTR3BO95264 441 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 CD3GP09693 182 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A15PP0C7V4 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A13PP0C7W8 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A14PP0C7W9 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM90A24PP0C7X0 464 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 RCVRNP35243 200 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 VEGFCP49767 419 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 GNG2P59768 71 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 MAP1AP78559 2803 aaPredicted RBP7.65□□□□□ -1.18
VPS50-207ENST00000458530 MRPS15P82914 257 aaKnown RBP7.65□□□□□ -1.18
VPS50-207ENST00000458530 FAM27E3Q08E93 113 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 SNTB2Q13425 540 aaKnown RBP7.65□□□□□ -1.18
VPS50-207ENST00000458530 OR8G1Q15617 311 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FBXL19-AS1Q494R0 122 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 RNASE12Q5GAN4 147 aaKnown RBP7.65□□□□□ -1.18
VPS50-207ENST00000458530 SPATA46Q5T0L3 261 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 OR2T2Q6IF00 324 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 OR10K2Q6IF99 312 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 FIP1L1Q6UN15 594 aaKnown RBP7.65□□□□□ -1.18
VPS50-207ENST00000458530 PLET1Q6UQ28 207 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 DNM1P46Q6ZS02 220 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 Q6ZTK2 550 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 LINC00596Q86U02 117 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 TMEM200AQ86VY9 491 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 Q8IYB0 196 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 ZNF611Q8N823 705 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 DTX3Q8N9I9 347 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 BHLHE23Q8NDY6 225 aa7.65□□□□□ -1.18
VPS50-207ENST00000458530 OR8G5Q8NG78 346 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms