RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TK1P04183 234 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CHRM2P08172 466 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PGA5P0DJD9 388 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 IGHV1-8P0DP01 117 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 HSD17B1P14061 328 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 DUSP1P28562 367 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PRDX2P32119 198 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 GDNFP39905 211 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 MAGEA2P43356 314 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 LUMP51884 338 aaPredicted RBP4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ACTA2P62736 377 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ACTG2P63267 376 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ACTC1P68032 377 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ACTA1P68133 377 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SLC35A2P78381 396 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CEACAM21Q3KPI0 293 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ABCA11PQ4W5N1 156 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 C9orf152Q5JTZ5 239 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SAMD4BQ5PRF9 694 aaKnown RBP4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TMEM236Q5W0B7 351 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ZNF626Q68DY1 528 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 LIAT1Q6ZQX7 453 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TMEM179BQ7Z7N9 219 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CALHM1Q8IU99 346 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CPOQ8IVL8 374 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 DEFB107AQ8IZN7 70 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PGAM4Q8N0Y7 254 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SLAMF9Q96A28 289 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 FOXRED1Q96CU9 486 aaPredicted RBP4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 HIST1H2AAQ96QV6 131 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CDRT15Q96T59 188 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 MYCBPQ99417 103 aaPredicted RBP4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 NRIP2Q9BQI9 281 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 OCSTAMPQ9BR26 566 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CADM1Q9BY67 442 aaKnown RBP4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PRSS22Q9GZN4 317 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PBOV1Q9GZY1 135 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 HEXA-AS1Q9H8Q6 139 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ING3Q9NXR8 418 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CD300AQ9UGN4 299 aa4.79□□□□□ -1.64
HLA-DPA3-207ENST00000454398 IGKV1-27A0A075B6S5 117 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 IGHV2-26A0A0B4J1V2 119 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TMEM269A0A1B0GVZ9 245 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 FAM230AA0A1W2PPH8 454 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PQLC2LA1A4F0 135 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ANKRD65E5RJM6 399 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PRR23D1E9PI22 279 aaPredicted RBP4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 NDUFAB1O14561 156 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ZNF737O75373 536 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 TTRP02766 147 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 AMY1AP04745 511 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 AMY2AP04746 511 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ZNF728P0DKX0 622 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PRR23D2P0DMB1 279 aaPredicted RBP4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SLC2A5P22732 501 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 GABRR1P24046 479 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 RAB25P57735 213 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CD83Q01151 205 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 EMX1Q04741 257 aaPredicted RBP4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 APOFQ13790 326 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 RBM39Q14498 530 aaKnown RBP4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 GINS1Q14691 196 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 AANATQ16613 207 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 DEFB136Q30KP8 78 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 FAM76BQ5HYJ3 339 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ZNF684Q5T5D7 378 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 OR2T5Q6IEZ7 315 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 LCNL1Q6ZST4 164 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 C8orf86Q6ZUL3 223 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 KRT77Q7Z794 578 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ZNF329Q86UD4 541 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 MRPL41Q8IXM3 137 aaKnown RBP4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ZNF561Q8N587 486 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ZNF676Q8N7Q3 588 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 LINC00482Q8N8I6 264 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PAPD5Q8NDF8 572 aaKnown RBP4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 OR4P4Q8NGL7 312 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 OR2T29Q8NH02 315 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CMTM5Q96DZ9 223 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 NOL4LQ96MY1 436 aaPredicted RBP4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ZNF714Q96N38 554 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PRR25Q96S07 402 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 FEVQ99581 238 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 ASCL2Q99929 193 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SLC25A33Q9BSK2 321 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CHID1Q9BWS9 393 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 DGCR6LQ9BY27 220 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 CCDC134Q9H6E4 229 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 REEP1Q9H902 201 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 RBFOX1Q9NWB1 397 aaKnown RBP4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 LINC00527Q9UJ94 153 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 LAMP5Q9UJQ1 280 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 IKZF2Q9UKS7 526 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 BAIAP2Q9UQB8 552 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 SLC22A13Q9Y226 551 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 PCDHGB5Q9Y5G0 923 aa4.78□□□□□ -1.64
HLA-DPA3-207ENST00000454398 C17orf98A8MV24 154 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 NUDT19A8MXV4 375 aa4.77□□□□□ -1.65
HLA-DPA3-207ENST00000454398 LOC110117498-PIK3R3F6TDL0 507 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms