RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 POLDIP2Q9Y2S7 368 aa17.21■□□□□ 0.35
VRK2-207ENST00000440705 ATP23Q9Y6H3 246 aa17.21■□□□□ 0.35
VRK2-207ENST00000440705 MEIOCA2RUB1 952 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 ZG16O60844 167 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 ECDO95905 644 aaPredicted RBP17.2■□□□□ 0.34
VRK2-207ENST00000440705 GSTP1P09211 210 aaKnown RBP17.2■□□□□ 0.34
VRK2-207ENST00000440705 BLVRBP30043 206 aaPredicted RBP17.2■□□□□ 0.34
VRK2-207ENST00000440705 SNTB1Q13884 538 aaKnown RBP17.2■□□□□ 0.34
VRK2-207ENST00000440705 MZT2BQ6NZ67 158 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 Q6ZTK2 550 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 OR10AD1Q8NGE0 317 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 ITLN2Q8WWU7 325 aaPredicted RBP17.2■□□□□ 0.34
VRK2-207ENST00000440705 ZMAT3Q9HA38 289 aaKnown RBP17.2■□□□□ 0.34
VRK2-207ENST00000440705 RHOFQ9HBH0 211 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 MTCH1Q9NZJ7 389 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 KLK11Q9UBX7 282 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 TMEM235A6NFC5 223 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 H7C417 338 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 SYNGR1O43759 233 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 LPLP06858 475 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 HIST1H1DP16402 221 aaKnown RBP17.2■□□□□ 0.34
VRK2-207ENST00000440705 BCL3P20749 454 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 NPBWR2P48146 333 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 TMEM50BP56557 158 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 AP3S2P59780 193 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 SSBP1Q04837 148 aaKnown RBP17.2■□□□□ 0.34
VRK2-207ENST00000440705 WDR86Q86TI4 376 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 FBXL14Q8N1E6 418 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 SCCPDHQ8NBX0 429 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 GPX8Q8TED1 209 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 COX4I2Q96KJ9 171 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 BBC3Q96PG8 261 aaPredicted RBP17.2■□□□□ 0.34
VRK2-207ENST00000440705 MRPL37Q9BZE1 423 aaKnown RBP17.2■□□□□ 0.34
VRK2-207ENST00000440705 OCEL1Q9H607 264 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 MTFP1Q9UDX5 166 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 ST3GAL6Q9Y274 331 aa17.2■□□□□ 0.34
VRK2-207ENST00000440705 WIPF3A6NGB9 483 aa17.19■□□□□ 0.34
VRK2-207ENST00000440705 PRSS44E7EML9 344 aa17.19■□□□□ 0.34
VRK2-207ENST00000440705 LYRM1O43325 122 aa17.19■□□□□ 0.34
VRK2-207ENST00000440705 CD3EP07766 207 aa17.19■□□□□ 0.34
VRK2-207ENST00000440705 GNB3P16520 340 aa17.19■□□□□ 0.34
VRK2-207ENST00000440705 GABRR1P24046 479 aa17.19■□□□□ 0.34
VRK2-207ENST00000440705 ZNF154Q13106 437 aa17.19■□□□□ 0.34
VRK2-207ENST00000440705 ADAM5Q6NVV9 412 aa17.19■□□□□ 0.34
VRK2-207ENST00000440705 SEH1LQ96EE3 360 aa17.19■□□□□ 0.34
VRK2-207ENST00000440705 C11orf54Q9H0W9 315 aaPredicted RBP17.19■□□□□ 0.34
VRK2-207ENST00000440705 TAS2R8Q9NYW2 309 aa17.19■□□□□ 0.34
VRK2-207ENST00000440705 TAAR3PQ9P1P4 343 aa17.19■□□□□ 0.34
VRK2-207ENST00000440705 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.18■□□□□ 0.34
VRK2-207ENST00000440705 CENPXA8MT69 81 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 FOXI3A8MTJ6 420 aaPredicted RBP17.18■□□□□ 0.34
VRK2-207ENST00000440705 F5H5P2 479 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 GRPP07492 148 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 RBM11P57052 281 aaKnown RBP17.18■□□□□ 0.34
VRK2-207ENST00000440705 FGF12P61328 243 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 DYRK1AQ13627 763 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 TAF9Q16594 264 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 PNLIPRP3Q17RR3 467 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 BEX5Q5H9J7 111 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 PLAC9Q5JTB6 97 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 Q6ZNX1 250 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 GDPD3Q7L5L3 318 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 Q8IYB0 196 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 OR2Z1Q8NG97 314 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 ARHGAP5-AS1Q96IT6 56 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 PLK3Q9H4B4 646 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.18■□□□□ 0.341e-6■■■■■ 33.9
VRK2-207ENST00000440705 HIVEP3Q5T1R4 2406 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 HCFC1P51610 2035 aa17.18■□□□□ 0.34
VRK2-207ENST00000440705 SRP9P49458 86 aaKnown RBP17.17■□□□□ 0.34
VRK2-207ENST00000440705 ACTBP60709 375 aa17.17■□□□□ 0.34
VRK2-207ENST00000440705 ACTG1P63261 375 aa17.17■□□□□ 0.34
VRK2-207ENST00000440705 GUCA2AQ02747 115 aa17.17■□□□□ 0.34
VRK2-207ENST00000440705 MAB21L1Q13394 359 aa17.17■□□□□ 0.34
VRK2-207ENST00000440705 KLF9Q13886 244 aaPredicted RBP17.17■□□□□ 0.34
VRK2-207ENST00000440705 PIGYQ3MUY2 71 aa17.17■□□□□ 0.34
VRK2-207ENST00000440705 NHLRC3Q5JS37 347 aa17.17■□□□□ 0.34
VRK2-207ENST00000440705 C7orf50Q9BRJ6 194 aaKnown RBP17.17■□□□□ 0.34
VRK2-207ENST00000440705 RBFOX1Q9NWB1 397 aaKnown RBP17.17■□□□□ 0.34
VRK2-207ENST00000440705 CACNG2Q9Y698 323 aa17.17■□□□□ 0.34
VRK2-207ENST00000440705 ANKRD20A5PA0PJZ0 165 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A10PA6NDY2 464 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A18PA6NE21 464 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A16PA6NEW6 464 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A20PA6NIJ5 464 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A8PA6NJQ4 464 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A7PA6NKC0 464 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 SERPINE3A8MV23 424 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A22PA8MWA6 464 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A12PA8MX19 464 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A5PA8MXJ8 464 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A23PA8MXZ1 464 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 SHISA9B4DS77 424 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 MFNGO00587 321 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 ACAA1P09110 424 aaPredicted RBP17.16■□□□□ 0.34
VRK2-207ENST00000440705 OR4A8P0C604 315 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A15PP0C7V4 464 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A13PP0C7W8 464 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A14PP0C7W9 464 aa17.16■□□□□ 0.34
VRK2-207ENST00000440705 FAM90A24PP0C7X0 464 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms