RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 TEX13DA0A0J9YY54 714 aaPredicted RBP6.47□□□□□ -1.37
COL17A1-204ENST00000433822 KANTRA0A1W2PQU2 76 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A10PA6NDY2 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A18PA6NE21 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A16PA6NEW6 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A20PA6NIJ5 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A8PA6NJQ4 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 LRRC3CA6NJW4 275 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A7PA6NKC0 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A22PA8MWA6 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A12PA8MX19 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A5PA8MXJ8 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A23PA8MXZ1 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 C21orf140B9A014 251 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 F8VVB4 439 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 F8VWA3 439 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 RPL36A-HNRNPH2H7BZ11 118 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 I3L521 148 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 SOCS1O15524 211 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 XRCC2O43543 280 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 SGCEO43556 437 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 SIX6O95475 246 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 SFT2D2O95562 160 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 CRHP06850 196 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A15PP0C7V4 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A13PP0C7W8 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A14PP0C7W9 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FAM90A24PP0C7X0 464 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 CNR1P21554 472 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 MICBQ29980 383 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 PHYHD1Q5SRE7 291 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 UQCC3Q6UW78 93 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 C6orf15Q6UXA7 325 aaPredicted RBP6.47□□□□□ -1.37
COL17A1-204ENST00000433822 MOB3CQ70IA8 216 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 DPPA2Q7Z7J5 298 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 GVQW1Q8N7I0 195 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 ZSCAN4Q8NAM6 433 aaPredicted RBP6.47□□□□□ -1.37
COL17A1-204ENST00000433822 TMEM104Q8NE00 496 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 SEMA6DQ8NFY4 1073 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 OR4S1Q8NGB4 309 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 OR5AP2Q8NGF4 316 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 OR2V1Q8NHB1 315 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 THAP6Q8TBB0 222 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 SUN5Q8TC36 379 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 PPP1R1CQ8WVI7 109 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 ZCCHC14Q8WYQ9 949 aaKnown RBP6.47□□□□□ -1.37
COL17A1-204ENST00000433822 ST8SIA2Q92186 375 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 NKD1Q969G9 470 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 GNRHR2Q96P88 292 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 IP6K3Q96PC2 410 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 GPER1Q99527 375 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 NICN1Q9BSH3 213 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 GPR87Q9BY21 358 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 PECRQ9BY49 303 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 PRDM14Q9GZV8 571 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 OPA3Q9H6K4 179 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 ZMAT3Q9HA38 289 aaKnown RBP6.47□□□□□ -1.37
COL17A1-204ENST00000433822 SDHAF2Q9NX18 166 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 PLEK2Q9NYT0 353 aa6.47□□□□□ -1.37
COL17A1-204ENST00000433822 FARSAQ9Y285 508 aaKnown RBP6.47□□□□□ -1.37
COL17A1-204ENST00000433822 ANKRD17O75179 2603 aaKnown RBP6.47□□□□□ -1.37
COL17A1-204ENST00000433822 CRTAPO75718 401 aaPredicted RBP6.46□□□□□ -1.38
COL17A1-204ENST00000433822 WDPCPO95876 746 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 CELA2AP08217 269 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 SLC2A1P11166 492 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 AMY2BP19961 511 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 PSMB6P28072 239 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 OR3A2P47893 321 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 SLC6A9P48067 706 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 CYB561P49447 251 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 GFRA1P56159 465 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 CARD18P57730 90 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 EIF5AP63241 154 aaKnown RBP6.46□□□□□ -1.38
COL17A1-204ENST00000433822 IL15RAQ13261 267 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 ARFRP1Q13795 201 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 OR8B8Q15620 311 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 UBE2V2Q15819 145 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 ACER2Q5QJU3 275 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 AADACL3Q5VUY0 350 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 OR52W1Q6IF63 320 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 Q6ZS49 121 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 COLCA1Q6ZS62 124 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 AAED1Q7RTV5 226 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 GALNTL5Q7Z4T8 443 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 CCDC36Q8IYA8 594 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 SAXO1Q8IYX7 474 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 ESX1Q8N693 406 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 INO80EQ8NBZ0 244 aaPredicted RBP6.46□□□□□ -1.38
COL17A1-204ENST00000433822 SLC30A7Q8NEW0 376 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 OR51T1Q8NGJ9 327 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 OR1S1Q8NH92 325 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 OR1F12Q8NHA8 337 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 PIGTQ969N2 578 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 CMBLQ96DG6 245 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 FBXO17Q96EF6 278 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 ARHGAP5-AS1Q96IT6 56 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 AQP10Q96PS8 301 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 S100A13Q99584 98 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 FOXB1Q99853 325 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 FAM173AQ9BQD7 235 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms