RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 C1QL2Q7Z5L3 287 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 NOXO1Q8NFA2 376 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 NINJ1Q92982 152 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 PRRG4Q9BZD6 226 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 SHARPINQ9H0F6 387 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 RGCCQ9H4X1 137 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 SLC35D1Q9NTN3 355 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 GAB2Q9UQC2 676 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 SPTBN1Q01082 2364 aaKnown RBP7.1□□□□□ -1.27
HPS4-205ENST00000429411 C5orf63A6NC05 138 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 DBX1A6NMT0 343 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 A8MXK9 166 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 SIGLEC6O43699 453 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 APOC1P02654 83 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 DAOP14920 347 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 MMP16P51512 607 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 ZNF813Q6ZN06 617 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 OVCH2Q7RTZ1 564 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 MISPQ8IVT2 679 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 LPAR5Q9H1C0 372 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 OPA3Q9H6K4 179 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 ZNF319Q9P2F9 582 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 MYOTQ9UBF9 498 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 SSUH2Q9Y2M2 353 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 WIF1Q9Y5W5 379 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 LHFPL6Q9Y693 200 aa7.1□□□□□ -1.27
HPS4-205ENST00000429411 A0A1B0GTQ1 180 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 TMEM218A2RU14 115 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 ZNF814B7Z6K7 855 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 C9J4A7 227 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 M0R135 149 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 CD63P08962 238 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 OR8U9P0C7N5 309 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 B4GALT1P15291 398 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 ZNF14P17017 642 aaPredicted RBP7.09□□□□□ -1.27
HPS4-205ENST00000429411 GNRHRP30968 328 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 FCGR2CP31995 323 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 HTR5AP47898 357 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 NXPH1P58417 271 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 EIF5AP63241 154 aaKnown RBP7.09□□□□□ -1.27
HPS4-205ENST00000429411 CCL7P80098 99 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 FLI1Q01543 452 aaPredicted RBP7.09□□□□□ -1.27
HPS4-205ENST00000429411 PEA15Q15121 130 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 HLA-BQ31612 363 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 SLC25A45Q8N413 288 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 PAQR4Q8N4S7 273 aaPredicted RBP7.09□□□□□ -1.27
HPS4-205ENST00000429411 OR5AP2Q8NGF4 316 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 LIPHQ8WWY8 451 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 FBXO17Q96EF6 278 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 C14orf79Q96F83 325 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 ZNF799Q96GE5 643 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 AKR1E2Q96JD6 320 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 OR10C1Q96KK4 312 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 GPR61Q9BZJ8 451 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 TLNRD1Q9H1K6 362 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 RHOFQ9HBH0 211 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 TMEM9BQ9NQ34 198 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 IL19Q9UHD0 177 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 LHX6Q9UPM6 363 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 FBXO7Q9Y3I1 522 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 EML5Q05BV3 1969 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 TNFSF11O14788 317 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 CYTIPO60759 359 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 SCGNO76038 276 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 ZNF735P0CB33 412 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 EPHA1P21709 976 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 TNFSF4P23510 183 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 CPT2P23786 658 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 DUSP1P28562 367 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 PTGFRP43088 359 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 SSBP1Q04837 148 aaKnown RBP7.09□□□□□ -1.27
HPS4-205ENST00000429411 PLAC9Q5JTB6 97 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 OR2A2Q6IF42 318 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 C5orf46Q6UWT4 87 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 DHRS13Q6UX07 377 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 DOK3Q7L591 496 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 RABEPKQ7Z6M1 372 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 S100A7AQ86SG5 101 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 TMEM217Q8N7C4 229 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 ZSCAN4Q8NAM6 433 aaPredicted RBP7.09□□□□□ -1.27
HPS4-205ENST00000429411 SEMA6DQ8NFY4 1073 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 ZNF501Q96CX3 271 aaPredicted RBP7.09□□□□□ -1.27
HPS4-205ENST00000429411 ZNF385AQ96PM9 386 aaKnown RBP7.09□□□□□ -1.27
HPS4-205ENST00000429411 GPHA2Q96T91 129 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 CITED1Q99966 193 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 FAM206AQ9NX38 181 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 ZNF407Q9C0G0 2248 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 ZZEF1O43149 2961 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 SHANK1Q9Y566 2161 aa7.09□□□□□ -1.27
HPS4-205ENST00000429411 DENND4AQ7Z401 1863 aa7.09□□□□□ -1.28
HPS4-205ENST00000429411 IGKV3D-11A0A0A0MRZ8 115 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 A0A1W2PQD3 144 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 A4D1N5 150 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 RAD51DO75771 328 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 ACTL6AO96019 429 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 OR13C7P0DN81 318 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 RPL12P30050 165 aaKnown RBP7.08□□□□□ -1.28
HPS4-205ENST00000429411 GLP1RP43220 463 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 GABRA4P48169 554 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 SSX2Q16385 188 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms