RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	DHRS2	Q13268	280 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	ISX	Q2M1V0	245 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	HIST2H3PS2	Q5TEC6	136 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	SLC35G3	Q8N808	338 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	OR4D10	Q8NGI6	311 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	ASB10	Q8WXI3	467 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	ADAT1	Q9BUB4	502 aa	Known RBP	11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	ZNF391	Q9UJN7	358 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	SNRPGP15	A8MWD9	76 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	C3orf80	F5H4A9	247 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	LINC01387	J3KSC0	135 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	ASCL1	P50553	236 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	NANOS3	P60323	173 aa	Known RBP	11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	COTL1	Q14019	142 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	AVPI1	Q5T686	147 aa		11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	MUC20	Q8N307	709 aa	Predicted RBP	11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.71	□□□□□ -0.54
BDNF-208	ENST00000418212	NDUFB6	O95139	128 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	TMEM11	P17152	192 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	ARRDC1	Q8N5I2	433 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	ZFP62	Q8NB50	900 aa	Predicted RBP	11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	NPAS1	Q99742	590 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	SHARPIN	Q9H0F6	387 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	ARID2	Q68CP9	1835 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212		A0A0J9YW62	118 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	OGG1	O15527	345 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	CFD	P00746	253 aa	Predicted RBP	11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	HOXD4	P09016	255 aa	Predicted RBP	11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	SELE	P16581	610 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	TLE4	Q04727	773 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	PPP1R1A	Q13522	171 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	OR2M3	Q8NG83	312 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	OR10V1	Q8NGI7	309 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	OR1S2	Q8NGQ3	325 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	MALSU1	Q96EH3	234 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	UCK1	Q9HA47	277 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	NDRG3	Q9UGV2	375 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	OTOF	Q9HC10	1997 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	LCT	P09848	1927 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	DEFB108A	A8MXU0	73 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	ADAM10	O14672	748 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	SOCS1	O15524	211 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	GABRA4	P48169	554 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	RNPS1	Q15287	305 aa	Known RBP	11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	NHLRC1	Q6VVB1	395 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	BAP18	Q8IXM2	172 aa		11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.7	□□□□□ -0.54
BDNF-208	ENST00000418212	PTP4A3	O75365	173 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	YIF1A	O95070	293 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	FREM3	P0C091	2139 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	TBP	P20226	339 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	GAL	P22466	123 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	PCP4	P48539	62 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	TMEM123	Q8N131	208 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	DUSP18	Q8NEJ0	188 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	WDR13	Q9H1Z4	485 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	KLHDC2	Q9Y2U9	406 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	hCG_1809904	A0A1W2PP81	198 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212		A0A1W2PPE2	198 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212		A0A1W2PR64	198 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212		A0A1W2PRV1	198 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	TIAF1	O95411	115 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	CRYAB	P02511	175 aa	Known RBP	11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	BGLAP	P02818	100 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	DEFA4	P12838	97 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	OR2F1	Q13607	317 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	LAMTOR1	Q6IAA8	161 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	THNSL2	Q86YJ6	484 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	GPX8	Q8TED1	209 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	ASB5	Q8WWX0	329 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	MARVELD3	Q96A59	401 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	H2AFB1	P0C5Y9	115 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	RAB11A	P62491	216 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	HAGH	Q16775	308 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	ADAM5	Q6NVV9	412 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	CDC20B	Q86Y33	519 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	TMEM229B	Q8NBD8	167 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	PINX1	Q96BK5	328 aa	Known RBP	11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	AMELY	Q99218	206 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	PRR13	Q9NZ81	148 aa		11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	MRPS18B	Q9Y676	258 aa	Known RBP	11.69	□□□□□ -0.54
BDNF-208	ENST00000418212	TRAV39	A0A0B4J263	110 aa		11.68	□□□□□ -0.54
BDNF-208	ENST00000418212		A0A0B4J293	547 aa		11.68	□□□□□ -0.54
BDNF-208	ENST00000418212	ZNF891	A8MT65	544 aa	Predicted RBP	11.68	□□□□□ -0.54
BDNF-208	ENST00000418212	ZNF724	A8MTY0	619 aa		11.68	□□□□□ -0.54
BDNF-208	ENST00000418212	CHRNB4	P30926	498 aa		11.68	□□□□□ -0.54
BDNF-208	ENST00000418212	LIMK1	P53667	647 aa		11.68	□□□□□ -0.54
BDNF-208	ENST00000418212	C9orf152	Q5JTZ5	239 aa		11.68	□□□□□ -0.54
BDNF-208	ENST00000418212	ZNF626	Q68DY1	528 aa		11.68	□□□□□ -0.54
BDNF-208	ENST00000418212	OR2A2	Q6IF42	318 aa		11.68	□□□□□ -0.54
BDNF-208	ENST00000418212	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.68	□□□□□ -0.54
BDNF-208	ENST00000418212		Q6ZRG5	221 aa		11.68	□□□□□ -0.54
BDNF-208	ENST00000418212	OR10X1	Q8NGY0	326 aa		11.68	□□□□□ -0.54
BDNF-208	ENST00000418212	LTBP1	Q14766	1721 aa		11.68	□□□□□ -0.54
BDNF-208	ENST00000418212	AQP7P3	A6NL99	342 aa		11.68	□□□□□ -0.54
BDNF-208	ENST00000418212	AQP7	O14520	342 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms