RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PURGQ9UJV8 347 aaKnown RBP13.36□□□□□ -0.27
SHMT2-202ENST00000414700 IGHV2OR16-5A0A0B4J2B6 119 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 A0A1B0GW55 424 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 SMPD2O60906 423 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 GATBO75879 557 aaKnown RBP13.35□□□□□ -0.27
SHMT2-202ENST00000414700 DUX4L2P0CJ85 424 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 DUX4L3P0CJ86 424 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 DUX4L4P0CJ87 422 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 DUX4L5P0CJ88 424 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 DUX4L6P0CJ89 424 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 DUX4L7P0CJ90 424 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 RPL35P42766 123 aaKnown RBP13.35□□□□□ -0.27
SHMT2-202ENST00000414700 VEGFCP49767 419 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 AKR1D1P51857 326 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 NAAAQ02083 359 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 FGL1Q08830 312 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 TMUB2Q71RG4 321 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 FAM169BQ8N8A8 192 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 PLPP7Q8NBV4 271 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 OR14K1Q8NGZ2 314 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 LINC01560Q8TB33 94 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 SMIM4Q8WVI0 70 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 FGGYQ96C11 551 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 DUX4Q9UBX2 424 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 TRBV5-7A0A0A0MS05 114 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 FAM74A7A6NL05 159 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 F8W036 122 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 OR2A4O95047 310 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 RNF224P0DH78 156 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 SEC61A1P61619 476 aaKnown RBP13.35□□□□□ -0.27
SHMT2-202ENST00000414700 FAM74A3Q4VXF1 159 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 LRRC46Q96FV0 321 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 OR2A7Q96R45 310 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 CA10Q9NS85 328 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 FLVCR2Q9UPI3 526 aa13.35□□□□□ -0.27
SHMT2-202ENST00000414700 NAP1L6A6NFF2 107 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 HMSDA8MTL9 139 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 DHRS3O75911 302 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 H2AFB1P0C5Y9 115 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 SRMP19623 302 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 GDNFP39905 211 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 UCP2P55851 309 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 FAM3AP98173 230 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 GLDNQ6ZMI3 551 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-202ENST00000414700 DOK3Q7L591 496 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 CDH26Q8IXH8 852 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 PLEKHA1Q9HB21 404 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 COA4Q9NYJ1 87 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 ABRACLQ9P1F3 81 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 PKDREJQ9NTG1 2253 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 hCG_38984A0A1B0GV85 526 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 H7C2Y5 167 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 KDM4BO94953 1096 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 FAHP16930 419 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 GSG1LQ6UXU4 331 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 OR51A2Q8NGJ7 313 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 SPSB4Q96A44 273 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 NKX3-1Q99801 234 aaPredicted RBP13.34□□□□□ -0.27
SHMT2-202ENST00000414700 OR2J1Q9GZK6 312 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 OR10A4Q9H209 315 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 TAS2R4Q9NYW5 299 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 V9GYS6 101 aa13.34□□□□□ -0.27
SHMT2-202ENST00000414700 TENM4Q6N022 2769 aa13.33□□□□□ -0.27
SHMT2-202ENST00000414700 CRYBG3Q68DQ2 2970 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 PQLC2LA1A4F0 135 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 TEX46H3BTG2 121 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 XRCC2O43543 280 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 ARL6IP5O75915 188 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 CLDN14O95500 239 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 ADRA2CP18825 462 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 CD40P25942 277 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 MAPK3P27361 379 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-202ENST00000414700 SFRP4Q6FHJ7 346 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-202ENST00000414700 GFI1Q99684 422 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 SEC22CQ9BRL7 303 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 REPIN1Q9BWE0 567 aaKnown RBP13.33□□□□□ -0.28
SHMT2-202ENST00000414700 NKX6-2Q9C056 277 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-202ENST00000414700 AUNIPQ9H7T9 357 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 GPN1Q9HCN4 374 aaPredicted RBP13.33□□□□□ -0.28
SHMT2-202ENST00000414700 HRASLSQ9HDD0 168 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 CRIM1Q9NZV1 1036 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 ZNF69Q9UC07 566 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 PIGLQ9Y2B2 252 aa13.33□□□□□ -0.28
SHMT2-202ENST00000414700 DPRXA6NFQ7 191 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 FAM25EA8MYX2 175 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 ARPC1BO15143 372 aaKnown RBP13.32□□□□□ -0.28
SHMT2-202ENST00000414700 ECDO95905 644 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-202ENST00000414700 MAS1P04201 325 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 CD2P06729 351 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 RAB3BP20337 219 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 GNALP38405 381 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 RAD52P43351 418 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 GSK3AP49840 483 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 PPP1CBP62140 327 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 TMEM255AQ5JRV8 349 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 Q6ZSR3 168 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 ZNF808Q8N4W9 903 aaPredicted RBP13.32□□□□□ -0.28
SHMT2-202ENST00000414700 DNAAF1Q8NEP3 725 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 OR1J1Q8NGS3 322 aa13.32□□□□□ -0.28
SHMT2-202ENST00000414700 MLXQ9UH92 298 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms