RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 OR10H4Q8NGA5 316 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 OR8B12Q8NGG6 310 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 OR13G1Q8NGZ3 307 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 CLDND2Q8NHS1 167 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 SGK3Q96BR1 496 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 MSI2Q96DH6 328 aaKnown RBP4.09□□□□□ -1.75
VPS41-205ENST00000414632 FAM71F1Q96KD3 344 aaPredicted RBP4.09□□□□□ -1.75
VPS41-205ENST00000414632 TMEM68Q96MH6 324 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 SLC30A2Q9BRI3 323 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 ADAT1Q9BUB4 502 aaKnown RBP4.09□□□□□ -1.75
VPS41-205ENST00000414632 C9orf16Q9BUW7 83 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 CYSLTR2Q9NS75 346 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 UFSP2Q9NUQ7 469 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 TMEM100Q9NV29 134 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 IMPAD1Q9NX62 359 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 USE1Q9NZ43 259 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 ENOPH1Q9UHY7 261 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 WIPI2Q9Y4P8 454 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 GMPPBQ9Y5P6 360 aa4.09□□□□□ -1.75
VPS41-205ENST00000414632 TRBV5-7A0A0A0MS05 114 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 TMEM269A0A1B0GVZ9 245 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 A6NIN4 97 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 ZNF670-ZNF695F2Z2N8 137 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 P2RY10O00398 339 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 XRCC2O43543 280 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 CLIC3O95833 236 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 PNPP00491 289 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 CD55P08174 381 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 TACSTD2P09758 323 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 SBK2P0C263 348 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 SRD5A1P18405 259 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 ACKR3P25106 362 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 HTR1FP30939 366 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 HIVEP2P31629 2446 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 CD80P33681 288 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 ATP6V1E1P36543 226 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 PMELP40967 661 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 RIDAP52758 137 aaKnown RBP4.08□□□□□ -1.76
VPS41-205ENST00000414632 GMFBP60983 142 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 SEC61A1P61619 476 aaKnown RBP4.08□□□□□ -1.76
VPS41-205ENST00000414632 GABPB1Q06547 395 aaPredicted RBP4.08□□□□□ -1.76
VPS41-205ENST00000414632 MAB21L1Q13394 359 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 ZMYND11Q15326 602 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 MPPED2Q15777 294 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 TP53I3Q53FA7 332 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 DOCK11Q5JSL3 2073 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 IGFL4Q6B9Z1 124 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 ZNF322Q6U7Q0 402 aaPredicted RBP4.08□□□□□ -1.76
VPS41-205ENST00000414632 ZNF826PQ6ZT77 177 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 NOXA1Q86UR1 476 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 HAPLN4Q86UW8 402 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 COMMD2Q86X83 199 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 C10orf67Q8IYJ2 551 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 ENTHD1Q8IYW4 607 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 YIPF7Q8N8F6 280 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 ZBTB8BQ8NAP8 495 aaPredicted RBP4.08□□□□□ -1.76
VPS41-205ENST00000414632 ZNF540Q8NDQ6 660 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 DEFB108BQ8NET1 73 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 Q8NFD4 153 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 OR8J1Q8NGP2 316 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 OR51E1Q8TCB6 317 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 CYGBQ8WWM9 190 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 RAB1CQ92928 201 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 LYZL4Q96KX0 146 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 OR8B4Q96RC9 309 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 SIGLEC11Q96RL6 698 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 GAL3ST1Q99999 423 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 MROQ9BYG7 248 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 YIPF3Q9GZM5 350 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 PBOV1Q9GZY1 135 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 METTL17Q9H7H0 456 aaPredicted RBP4.08□□□□□ -1.76
VPS41-205ENST00000414632 ZNF665Q9H7R5 613 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 AMBNQ9NP70 447 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 TMEM106BQ9NUM4 274 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 CLN6Q9NWW5 311 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 FAM206AQ9NX38 181 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 IL19Q9UHD0 177 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 MRM2Q9UI43 246 aaKnown RBP4.08□□□□□ -1.76
VPS41-205ENST00000414632 PPP1R3CQ9UQK1 317 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 RHBDD3Q9Y3P4 386 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 NPTNQ9Y639 398 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 CEPT1Q9Y6K0 416 aa4.08□□□□□ -1.76
VPS41-205ENST00000414632 IGHV3OR15-7A0A075B7D8 119 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 LOC100130705A0A1B0GUX0 176 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 hCG_38984A0A1B0GV85 526 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 A0A1W2PQL4 384 aaPredicted RBP4.07□□□□□ -1.76
VPS41-205ENST00000414632 ANKRD30BLA7E2S9 258 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 ZNF850A8MQ14 1090 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 E9PQ18 207 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 LOC110117498-PIK3R3F6TDL0 507 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 TMEM178BH3BS89 294 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 RHODO00212 210 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 DLGAP1O14490 977 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 LMX1BO60663 402 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 SRSF10O75494 262 aaKnown RBP4.07□□□□□ -1.76
VPS41-205ENST00000414632 IGHV2-70P01814 119 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 IGHV2-5P01817 119 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 APOC1P02654 83 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 TFF1P04155 84 aa4.07□□□□□ -1.76
VPS41-205ENST00000414632 KRT8P05787 483 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms