RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 TUBAL3A6NHL2 446 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 TRAPPC2LH3BP13 241 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 GEMIN2O14893 280 aaKnown RBP10.6□□□□□ -0.71
CHMP3-204ENST00000409727 LYRM1O43325 122 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 PTTG1O95997 202 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 CHRM2P08172 466 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 ZNF250P15622 560 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 CPT2P23786 658 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 RBMXP38159 391 aaKnown RBP10.6□□□□□ -0.71
CHMP3-204ENST00000409727 RFX2P48378 723 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 TMEM50BP56557 158 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 MRPS10P82664 201 aaKnown RBP10.6□□□□□ -0.71
CHMP3-204ENST00000409727 ZNF154Q13106 437 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 ZNF260Q3ZCT1 412 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 GLCCI1Q86VQ1 547 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 ZSCAN4Q8NAM6 433 aaPredicted RBP10.6□□□□□ -0.71
CHMP3-204ENST00000409727 SCCPDHQ8NBX0 429 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 OR13G1Q8NGZ3 307 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 NUDCD2Q8WVJ2 157 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 COX4I2Q96KJ9 171 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 Q96M66 194 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 NEDD4LQ96PU5 975 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 ESRP2Q9H6T0 727 aaKnown RBP10.6□□□□□ -0.71
CHMP3-204ENST00000409727 IL36RNQ9UBH0 155 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 ST3GAL6Q9Y274 331 aa10.6□□□□□ -0.71
CHMP3-204ENST00000409727 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.59□□□□□ -0.71
CHMP3-204ENST00000409727 PLSCR5A0PG75 271 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 CDIPTO14735 213 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 RBBP9O75884 186 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 SCGNO76038 276 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 MT-ND4P03905 459 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 PCGF3Q3KNV8 242 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 PRAMEF6Q5VXH4 476 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 BRICD5Q6PL45 260 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 SSX8Q7RTT4 187 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 C6orf201Q7Z4U5 140 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 MKXQ8IYA7 352 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 AQP3Q92482 292 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 SEH1LQ96EE3 360 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 TM2D1Q9BX74 207 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 SLC22A4Q9H015 551 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 UFSP2Q9NUQ7 469 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 TAAR3PQ9P1P4 343 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 KCNK7Q9Y2U2 307 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 NOP16Q9Y3C1 178 aaKnown RBP10.59□□□□□ -0.71
CHMP3-204ENST00000409727 CACNG2Q9Y698 323 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.59□□□□□ -0.71
CHMP3-204ENST00000409727 LRP5LA4QPB2 252 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 ZSCAN5BA6NJL1 495 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 A6NLC8 198 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 SPRY3O43610 288 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 IGHV3-13P01766 116 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 LPLP06858 475 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 HIST1H1DP16402 221 aaKnown RBP10.59□□□□□ -0.71
CHMP3-204ENST00000409727 DUSP1P28562 367 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 SELENOVP59797 346 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 MAB21L1Q13394 359 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 FAM189A2Q15884 450 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 NKPD1Q17RQ9 610 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 FAAP20Q6NZ36 180 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 MZT2BQ6NZ67 158 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 CCBE1Q6UXH8 406 aaPredicted RBP10.59□□□□□ -0.71
CHMP3-204ENST00000409727 Q6ZNX1 250 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 ZNF826PQ6ZT77 177 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 TRAPPC6BQ86SZ2 158 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 FAM89BQ8N5H3 189 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 NUP37Q8NFH4 326 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 ENKURQ8TC29 256 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 NEUROG1Q92886 237 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 CXXC4Q9H2H0 198 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 PLEKHJ1Q9NW61 149 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 IL36GQ9NZH8 169 aa10.59□□□□□ -0.71
CHMP3-204ENST00000409727 H7C417 338 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 J3QT63 122 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 TPPPO94811 219 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 OR4A8P0C604 315 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 PRKACAP17612 351 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 RBM11P57052 281 aaKnown RBP10.58□□□□□ -0.72
CHMP3-204ENST00000409727 GNG2P59768 71 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 HOXA4Q00056 320 aaPredicted RBP10.58□□□□□ -0.72
CHMP3-204ENST00000409727 TFF3Q07654 80 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 IL24Q13007 206 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 ARFRP1Q13795 201 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 KLF9Q13886 244 aaPredicted RBP10.58□□□□□ -0.72
CHMP3-204ENST00000409727 MPPED2Q15777 294 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 NCMAPQ5T1S8 102 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 SAXO1Q8IYX7 474 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 GPX8Q8TED1 209 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 ITLN2Q8WWU7 325 aaPredicted RBP10.58□□□□□ -0.72
CHMP3-204ENST00000409727 MRPL24Q96A35 216 aaKnown RBP10.58□□□□□ -0.72
CHMP3-204ENST00000409727 PECRQ9BY49 303 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 MMP28Q9H239 520 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 PCDHB16Q9NRJ7 776 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 MTFP1Q9UDX5 166 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 RBMX2Q9Y388 322 aaKnown RBP10.58□□□□□ -0.72
CHMP3-204ENST00000409727 ADGRG4Q8IZF6 3080 aa10.58□□□□□ -0.72
CHMP3-204ENST00000409727 AKR7A2O43488 359 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 OR7C1O76099 320 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-204ENST00000409727 CD3EP07766 207 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 ADIPOQQ15848 244 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms