RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 SFTPA2Q8IWL1 248 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 CADM3Q8N126 398 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 OR51I2Q9H344 312 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 KPTNQ9Y664 436 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 CST7O76096 145 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 OPN1MWP04001 364 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 OPN1MW2P0DN77 364 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 OPN1MW3P0DN78 364 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 LIFP15018 202 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 ZNF17P17021 662 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 GNG3P63215 75 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 OR2F1Q13607 317 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 ACSM6Q6P461 480 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 OR5AP2Q8NGF4 316 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 OTOSQ8NHW6 89 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 ZNF416Q9BWM5 594 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 NKX6-2Q9C056 277 aaPredicted RBP12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 PSG11Q9UQ72 335 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 MRPS18BQ9Y676 258 aaKnown RBP12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 NKX2-8O15522 239 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 SRD5A2P31213 254 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 TAGLNQ01995 201 aaKnown RBP12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 OR5V1Q9UGF6 321 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 ZNF32P17041 273 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 GABRB1P18505 474 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 C2orf50Q96LR7 162 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 SLC2A8Q9NY64 477 aa12.66□□□□□ -0.38
PCDHA11-201ENST00000398640 ZNF320A2RRD8 509 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 TRAPPC2P0DI81 140 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 TRAPPC2BP0DI82 140 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 DDOSTP39656 456 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 PDZK1IP1Q13113 114 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 ZNF788Q6ZQV5 615 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 LYG2Q86SG7 212 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 MCHR2Q969V1 340 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 OR8B4Q96RC9 309 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 LRRC3CA6NJW4 275 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 PRRX1P54821 245 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 Q6ZNX1 250 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 OR4C16Q8NGL9 310 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 TMEM171Q8WVE6 324 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 CHODLQ9H9P2 273 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 ST8SIA5O15466 376 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 MPGP29372 298 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 FAM181AQ8N9Y4 354 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 ARHGDIGQ99819 225 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 SMIM7Q9BQ49 75 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 PIGMQ9H3S5 423 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 G3V3Q6 166 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 GREM1O60565 184 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 PTHLHP12272 177 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 HTN1P15515 57 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 VN1R4Q7Z5H5 301 aa12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 AMMECR1Q9Y4X0 333 aaPredicted RBP12.65□□□□□ -0.38
PCDHA11-201ENST00000398640 MBP02144 154 aa12.65□□□□□ -0.39
PCDHA11-201ENST00000398640 LRRTM1Q86UE6 522 aa12.65□□□□□ -0.39
PCDHA11-201ENST00000398640 ZNF441Q8N8Z8 693 aa12.65□□□□□ -0.39
PCDHA11-201ENST00000398640 C20orf141Q9NUB4 165 aa12.65□□□□□ -0.39
PCDHA11-201ENST00000398640 IGKV3-7A0A075B6H7 116 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 FABP9Q0Z7S8 132 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 ASAH1Q13510 395 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 TUSC5Q8IXB3 177 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 OR5M8Q8NGP6 311 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 NUBPLQ8TB37 319 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 DOK1Q99704 481 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 COA4Q9NYJ1 87 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 LAMP3Q9UQV4 416 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 FUT3P21217 361 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 FHL5Q5TD97 284 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 MMP25Q9NPA2 562 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 AMDHD2Q9Y303 409 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 EPXP11678 715 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 ACP1P24666 158 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 PRICKLE4Q2TBC4 344 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 Q3ZCU0 254 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 RBM14Q96PK6 669 aaKnown RBP12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 CYR61O00622 381 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 OR4A8P0C604 315 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 ZNF425Q6IV72 752 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 BLNKQ8WV28 456 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 C4orf45Q96LM5 186 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 AAMDCQ9H7C9 122 aa12.64□□□□□ -0.39
PCDHA11-201ENST00000398640 B3GALNT1O75752 331 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 ACTL6AO96019 429 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 FAAP24Q9BTP7 215 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 DUSP21Q9H596 190 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 GLRX2Q9NS18 164 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 GAR1Q9NY12 217 aaKnown RBP12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 A0A0B4J2E0 115 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 A0A1B0GX12 115 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 EVX1P49640 407 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 CNN1P51911 297 aaKnown RBP12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 SIGLECL1Q8N7X8 197 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 SLC24A4Q8NFF2 622 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 ERRFI1Q9UJM3 462 aaPredicted RBP12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 SULT1A3P0DMM9 295 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 SULT1A4P0DMN0 295 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 CD1EP15812 388 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 OR2B8PP59922 312 aa12.63□□□□□ -0.39
PCDHA11-201ENST00000398640 ENDOGQ14249 297 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms