RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ADAM5Q6NVV9 412 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 VSTM2LQ96N03 204 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 OR1A1Q9P1Q5 309 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 FOXJ3Q9UPW0 622 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 PRF1P14222 555 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 ORM2P19652 201 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 BCL3P20749 454 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 LPAR6P43657 344 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 LYZP61626 148 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 TIPARPQ7Z3E1 657 aaKnown RBP10.07□□□□□ -0.8
TTC28-201ENST00000397906 KCNK15Q9H427 330 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 NTMQ9P121 344 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 TDRD15B5MCY1 1934 aaKnown RBP10.07□□□□□ -0.8
TTC28-201ENST00000397906 CNTRLQ7Z7A1 2325 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 ABHD14AQ9BUJ0 271 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 GON7Q9BXV9 100 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 ZNF727A8MUV8 499 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 JTBO76095 146 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 MT-ND4LP03901 98 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 MASP2O00187 686 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 DLL1O00548 723 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 RPS4XP62701 263 aaKnown RBP10.07□□□□□ -0.8
TTC28-201ENST00000397906 LYG2Q86SG7 212 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 CARFQ8N187 725 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 LRRC3BQ96PB8 259 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 FBXO8Q9NRD0 319 aa10.07□□□□□ -0.8
TTC28-201ENST00000397906 SCN3AQ9NY46 2000 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 CTLA4P16410 223 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 H3F3CQ6NXT2 135 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 CDIPTO14735 213 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 CELA2AP08217 269 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 PSMB6P28072 239 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 MESP2Q0VG99 397 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 OR5H6Q8NGV6 325 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 TMUB1Q9BVT8 246 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 OPN3Q9H1Y3 402 aaPredicted RBP10.06□□□□□ -0.8
TTC28-201ENST00000397906 C16orf97H3BN30 126 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 RAB7AP51149 207 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 OR4F17Q8NGA8 305 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 MSL2Q9HCI7 577 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 RYDENQ9NUL5 291 aaKnown RBP10.06□□□□□ -0.8
TTC28-201ENST00000397906 MYO16Q9Y6X6 1858 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 ASPDHA6ND91 283 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 UMAD1C9J7I0 102 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 FAHD1Q6P587 224 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 BCL2L2Q92843 193 aaPredicted RBP10.06□□□□□ -0.8
TTC28-201ENST00000397906 GNPNAT1Q96EK6 184 aaPredicted RBP10.06□□□□□ -0.8
TTC28-201ENST00000397906 SH2D5Q6ZV89 423 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 OR1B1Q8NGR6 318 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 MARC2Q969Z3 335 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 SPSB1Q96BD6 273 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 SLC37A1P57057 533 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 COL11A2P13942 1736 aaPredicted RBP10.06□□□□□ -0.8
TTC28-201ENST00000397906 SP9P0CG40 484 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 LRRTM1Q86UE6 522 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 WFDC3Q8IUB2 231 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 NUBPLQ8TB37 319 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 RXFP4Q8TDU9 374 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 SEBOXQ9HB31 216 aaPredicted RBP10.06□□□□□ -0.8
TTC28-201ENST00000397906 GLRX2Q9NS18 164 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 ZFP36L2P47974 494 aaKnown RBP10.06□□□□□ -0.8
TTC28-201ENST00000397906 C19orf43Q9BQ61 176 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 MS4A7Q9GZW8 240 aaPredicted RBP10.06□□□□□ -0.8
TTC28-201ENST00000397906 BRWD3Q6RI45 1802 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 SLC25A5P05141 298 aaKnown RBP10.06□□□□□ -0.8
TTC28-201ENST00000397906 CD276Q5ZPR3 534 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 SLC22A18ASQ8N1D0 253 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 OR4C16Q8NGL9 310 aa10.06□□□□□ -0.8
TTC28-201ENST00000397906 SMAD7O15105 426 aaKnown RBP10.05□□□□□ -0.8
TTC28-201ENST00000397906 C11orf42Q8N5U0 333 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 DRAXINQ8NBI3 349 aaPredicted RBP10.05□□□□□ -0.8
TTC28-201ENST00000397906 OR8B12Q8NGG6 310 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 OR1L4Q8NGR5 311 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 TRPM6Q9BX84 2022 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 HAX1O00165 279 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 CNN1P51911 297 aaKnown RBP10.05□□□□□ -0.8
TTC28-201ENST00000397906 PPP5D1E7EU14 171 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 ECSCRQ19T08 205 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 C1orf185Q5T7R7 199 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 GRAMD2BQ96HH9 432 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 A1L4Q6 167 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 SP1P08047 785 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 MDH2P40926 338 aaKnown RBP10.05□□□□□ -0.8
TTC28-201ENST00000397906 NPAP1Q9NZP6 1156 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 TRBV23-1A0A0A0MS06 115 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 MS4A18H0YCH9 400 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 ERVFC1-1P60608 527 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 MS4A18Q3C1V0 323 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 FNDC7Q5VTL7 733 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 C1QL3Q5VWW1 255 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 CCDC190Q86UF4 302 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 PCDHGA9Q9Y5G4 932 aaKnown RBP10.05□□□□□ -0.8
TTC28-201ENST00000397906 OR2C1O95371 312 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 CLEC2AQ6UVW9 174 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 BRS3P32247 399 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 OR2F1Q13607 317 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 TGIF1Q15583 401 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 NUFIP2Q7Z417 695 aaKnown RBP10.05□□□□□ -0.8
TTC28-201ENST00000397906 DYNLRB2Q8TF09 96 aa10.05□□□□□ -0.8
TTC28-201ENST00000397906 MARF1Q9Y4F3 1742 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms