RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 PPP1R3CQ9UQK1 317 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 PKDREJQ9NTG1 2253 aa19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 RAI1Q7Z5J4 1906 aaPredicted RBP19.94■□□□□ 0.78
TSPAN4-202ENST00000397396 SYNGR1O43759 233 aa19.93■□□□□ 0.78
TSPAN4-202ENST00000397396 CDC14BO60729 498 aa19.93■□□□□ 0.78
TSPAN4-202ENST00000397396 MPPED2Q15777 294 aa19.93■□□□□ 0.78
TSPAN4-202ENST00000397396 WDR82Q6UXN9 313 aa19.93■□□□□ 0.78
TSPAN4-202ENST00000397396 C1QL2Q7Z5L3 287 aa19.93■□□□□ 0.78
TSPAN4-202ENST00000397396 MOGAT3Q86VF5 341 aa19.93■□□□□ 0.78
TSPAN4-202ENST00000397396 C1orf87Q8N0U7 546 aa19.93■□□□□ 0.78
TSPAN4-202ENST00000397396 OR5H6Q8NGV6 325 aa19.93■□□□□ 0.78
TSPAN4-202ENST00000397396 A0A0A6YYH2 397 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 IGKV1-12A0A0C4DH73 117 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 A6NJ64 397 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 FAM25AB3EWG3 89 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 FAM25CB3EWG5 89 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 FAM25GB3EWG6 89 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 H3BUI4 141 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 CTDSP2O14595 271 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 HPGDSO60760 199 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 HTR3BO95264 441 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 MPIG6BO95866 241 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 IGKV1D-12P01611 117 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 MGMTP16455 207 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 FGF12P61328 243 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 LAX1Q8IWV1 398 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 C11orf53Q8IXP5 236 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 OSR2Q8N2R0 312 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 FAM46BQ96A09 425 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 S100A16Q96FQ6 103 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 NRIP2Q9BQI9 281 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 GCM1Q9NP62 436 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 RASL12Q9NYN1 266 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 MTCH1Q9NZJ7 389 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 RNF7Q9UBF6 113 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 RABL2AQ9UBK7 228 aaPredicted RBP19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 RABL2BQ9UNT1 228 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 NPTNQ9Y639 398 aa19.92■□□□□ 0.78
TSPAN4-202ENST00000397396 ICE1Q9Y2F5 2266 aa19.91■□□□□ 0.78
TSPAN4-202ENST00000397396 RHBDL1O75783 438 aa19.91■□□□□ 0.78
TSPAN4-202ENST00000397396 CPT2P23786 658 aa19.91■□□□□ 0.78
TSPAN4-202ENST00000397396 UNC119Q13432 240 aa19.91■□□□□ 0.78
TSPAN4-202ENST00000397396 NHLRC3Q5JS37 347 aa19.91■□□□□ 0.78
TSPAN4-202ENST00000397396 RAB12Q6IQ22 244 aa19.91■□□□□ 0.78
TSPAN4-202ENST00000397396 BAIAP2L2Q6UXY1 529 aa19.91■□□□□ 0.78
TSPAN4-202ENST00000397396 LINC00596Q86U02 117 aa19.91■□□□□ 0.78
TSPAN4-202ENST00000397396 CXorf56Q9H5V9 222 aa19.91■□□□□ 0.78
TSPAN4-202ENST00000397396 IGHV3-64DA0A0J9YX35 117 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 SRRM5B3KS81 715 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 AKR7A2O43488 359 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 NXPH2O95156 264 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 SFTPBP07988 381 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 CHRM2P08172 466 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 BCL3P20749 454 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 ERVK11-1P61568 191 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 RPS27AP62979 156 aaKnown RBP19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 MRPS11P82912 194 aaKnown RBP19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 SMIM21Q3B7S5 101 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 SPANXN2Q5MJ10 180 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 FAM90A1Q86YD7 464 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 ZNF295-AS1Q8N0V1 137 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 FAM58AQ8N1B3 248 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 ZCCHC24Q8N2G6 241 aaKnown RBP19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 OR10K1Q8NGX5 313 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 LRRC29Q8WV35 223 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 S100ZQ8WXG8 99 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 EMG1Q92979 244 aaKnown RBP19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 SLC25A38Q96DW6 304 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 TSC22D3Q99576 134 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 CCL19Q99731 98 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 TM2D1Q9BX74 207 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 MIXL1Q9H2W2 232 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 DIABLOQ9NR28 239 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 EDARQ9UNE0 448 aa19.9■□□□□ 0.78
TSPAN4-202ENST00000397396 IGHV1-69-2A0A0G2JMI3 117 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A10PA6NDY2 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A18PA6NE21 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A16PA6NEW6 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A20PA6NIJ5 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A8PA6NJQ4 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A7PA6NKC0 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A22PA8MWA6 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A12PA8MX19 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A5PA8MXJ8 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A23PA8MXZ1 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A15PP0C7V4 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A13PP0C7W8 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A14PP0C7W9 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 FAM90A24PP0C7X0 464 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 GLRA1P23415 457 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 OR10K2Q6IF99 312 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 ZNF826PQ6ZT77 177 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 TMEM104Q8NE00 496 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 OR56B1Q8NGI3 324 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 OR51T1Q8NGJ9 327 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 DIRAS2Q96HU8 199 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 NUDT16L1Q9BRJ7 211 aaKnown RBP19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 SELENOIQ9C0D9 397 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 ATG5Q9H1Y0 275 aa19.89■□□□□ 0.77
TSPAN4-202ENST00000397396 KCNK15Q9H427 330 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms