RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 OR2T5Q6IEZ7 315 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 LCN8Q6JVE9 175 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 KCTD18Q6PI47 426 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-208ENST00000397204 HAGHLQ6PII5 290 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-208ENST00000397204 MOB3CQ70IA8 216 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 KRT77Q7Z794 578 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 LHFPL4Q7Z7J7 247 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 DYNAPQ8N1N2 210 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 OR11H6Q8NGC7 330 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 OR4M1Q8NGD0 313 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 OR2T29Q8NH02 315 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 TEX47Q8TBZ9 253 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 MAGIXQ9H6Y5 334 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 REEP1Q9H902 201 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 NDE1Q9NXR1 346 aa7.05□□□□□ -1.28
CAPN3-208ENST00000397204 SAMHD1Q9Y3Z3 626 aaKnown RBP7.05□□□□□ -1.28
CAPN3-208ENST00000397204 TMEM269A0A1B0GVZ9 245 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 ODF3BA8MYP8 253 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 H3BN98 237 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 H3BS24 57 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 J3QT63 122 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 K7N7A8 449 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 SELENOFO60613 162 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 ZNF254O75437 659 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 NXPH2O95156 264 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 DUS4LO95620 317 aaKnown RBP7.04□□□□□ -1.28
CAPN3-208ENST00000397204 MPIG6BO95866 241 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 NRASP01111 189 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 ARG1P05089 322 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 ZNF728P0DKX0 622 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 IGLL1P15814 213 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 CCL3L1P16619 93 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 OR12D2P58182 307 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 BLCAPP62952 87 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 HSP90B2PQ58FF3 399 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 SLC35D3Q5M8T2 416 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 ZNF684Q5T5D7 378 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 ZNF626Q68DY1 528 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 PLBD1Q6P4A8 553 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 C16orf89Q6UX73 402 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 CYP2R1Q6VVX0 501 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 TRPM8Q7Z2W7 1104 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 TMEM219Q86XT9 240 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 EGFL6Q8IUX8 553 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 OR5AU1Q8NGC0 362 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 OR5M11Q96RB7 305 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 OR8B4Q96RC9 309 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 FEVQ99581 238 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 NRIP2Q9BQI9 281 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 YIPF3Q9GZM5 350 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-208ENST00000397204 ENPP5Q9UJA9 477 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 LAMP5Q9UJQ1 280 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 POLDIP2Q9Y2S7 368 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 U3KQV3 271 aa7.04□□□□□ -1.28
CAPN3-208ENST00000397204 KRTAP9-6A0A140TA67 174 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 FAM90A22PA8MWA6 464 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 F2RL2O00254 374 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 DLGAP1O14490 977 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 SYNGR1O43759 233 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 SNX3O60493 162 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 E2F6O75461 281 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 IGLV3-1P01715 115 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 CHRM2P08172 466 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 AZGP1P25311 298 aaKnown RBP7.03□□□□□ -1.28
CAPN3-208ENST00000397204 VDAC2P45880 294 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-208ENST00000397204 HAAOP46952 286 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 MNAT1P51948 309 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 ROM1Q03395 351 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 MEF2CQ06413 473 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-208ENST00000397204 ZNF273Q14593 569 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 GINS1Q14691 196 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 FAM98BQ52LJ0 330 aaKnown RBP7.03□□□□□ -1.28
CAPN3-208ENST00000397204 PLA1AQ53H76 456 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 DMRTC1Q5HYR2 192 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 DEFB121Q5J5C9 76 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 CLVS2Q5SYC1 327 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 MINOS1Q5TGZ0 78 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 PLCXD3Q63HM9 321 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 ZNF782Q6ZMW2 699 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-208ENST00000397204 PIGWQ7Z7B1 504 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 CENPVQ7Z7K6 275 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-208ENST00000397204 CPOQ8IVL8 374 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 ZNF679Q8IYX0 411 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 DEFB107AQ8IZN7 70 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 IQCF1Q8N6M8 205 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 OR10G2Q8NGC3 310 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 OR51E1Q8TCB6 317 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 GIPC3Q8TF64 312 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 ASB17Q8WXJ9 295 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 RCC1LQ96I51 464 aaKnown RBP7.03□□□□□ -1.28
CAPN3-208ENST00000397204 ZNF488Q96MN9 340 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 TEAD3Q99594 435 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 NIPSNAP1Q9BPW8 284 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 MROQ9BYG7 248 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 PBOV1Q9GZY1 135 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 HES4Q9HCC6 221 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 GPR84Q9NQS5 396 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 FAM206AQ9NX38 181 aa7.03□□□□□ -1.28
CAPN3-208ENST00000397204 VNN3Q9NY84 501 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms