RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 NDUFB3O43676 98 aa12.52□□□□□ -0.4
COL4A3-202ENST00000396578 PLPP2O43688 288 aa12.52□□□□□ -0.4
COL4A3-202ENST00000396578 INHBBP09529 407 aa12.52□□□□□ -0.4
COL4A3-202ENST00000396578 SMIM6P0DI80 62 aa12.52□□□□□ -0.4
COL4A3-202ENST00000396578 RPS4Y1P22090 263 aaKnown RBP12.52□□□□□ -0.4
COL4A3-202ENST00000396578 SUMO3P55854 103 aaPredicted RBP12.52□□□□□ -0.4
COL4A3-202ENST00000396578 ACVR1Q04771 509 aa12.52□□□□□ -0.4
COL4A3-202ENST00000396578 KISS1Q15726 138 aa12.52□□□□□ -0.4
COL4A3-202ENST00000396578 DOLPP1Q86YN1 238 aa12.52□□□□□ -0.4
COL4A3-202ENST00000396578 A0A087WUJ7 227 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 CBR3O75828 277 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 SFT2D2O95562 160 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 WNT1P04628 370 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 ZGLP1P0C6A0 271 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 SULT1A1P50225 295 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 FGF8P55075 233 aaPredicted RBP12.52□□□□□ -0.41
COL4A3-202ENST00000396578 FAM53BQ14153 422 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 KLK8O60259 260 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 C8orf44Q96CB5 159 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 PECRQ9BY49 303 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 ZBP1Q9H171 429 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 NAA60Q9H7X0 242 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 HIST1H1DP16402 221 aaKnown RBP12.52□□□□□ -0.41
COL4A3-202ENST00000396578 PDPNQ86YL7 162 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 FGF22Q9HCT0 170 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 TNFRSF1AP19438 455 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 SDHBP21912 280 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 ATP6V1FQ16864 119 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 TRILQ7L0X0 811 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 OR5A2Q8NGI9 324 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 OR10G4Q8NGN3 311 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 OR10G9Q8NGN4 311 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 OR10G7Q8NGN6 311 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 WFDC5Q8TCV5 224 aa12.52□□□□□ -0.41
COL4A3-202ENST00000396578 B4DEV8 164 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 ZNF260Q3ZCT1 412 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 PTOV1Q86YD1 416 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 ELSPBP1Q96BH3 223 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 TOX2Q96NM4 488 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 GPX7Q96SL4 187 aaPredicted RBP12.51□□□□□ -0.41
COL4A3-202ENST00000396578 NRAPQ86VF7 1730 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 CYR61O00622 381 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 GNG10P50151 68 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 FNDC7Q5VTL7 733 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 OTPQ5XKR4 325 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 Q7L0L9 218 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 PACRGQ96M98 296 aaPredicted RBP12.51□□□□□ -0.41
COL4A3-202ENST00000396578 MRPL37Q9BZE1 423 aaKnown RBP12.51□□□□□ -0.41
COL4A3-202ENST00000396578 VN1R1Q9GZP7 353 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 CXCL13O43927 109 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 OR5AC1P0C628 307 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 ACAA2P42765 397 aaKnown RBP12.51□□□□□ -0.41
COL4A3-202ENST00000396578 PTGFRP43088 359 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 SPRY3O43610 288 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 ACP1P24666 158 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 DYNLT3P51808 116 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 SLC25A1P53007 311 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 KIRREL2Q6UWL6 708 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 NEURL2Q9BR09 285 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 THYN1Q9P016 225 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 MTFP1Q9UDX5 166 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 SCAND1P57086 179 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 DGAT2L7PQ6IED9 249 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 TGIF2LYQ8IUE0 185 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 CACNG5Q9UF02 275 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 ZNF318Q5VUA4 2279 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 TUBGCP6Q96RT7 1819 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 DNASE2O00115 360 aaPredicted RBP12.51□□□□□ -0.41
COL4A3-202ENST00000396578 FCGR3BO75015 233 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 MBPP02686 304 aaPredicted RBP12.51□□□□□ -0.41
COL4A3-202ENST00000396578 MICBQ29980 383 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 OR1B1Q8NGR6 318 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 WDFY2Q96P53 400 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 MARCH5Q9NX47 278 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 DHRS3O75911 302 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 ABLIM3O94929 683 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 CRYBB2P43320 205 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 GRAMD2BQ96HH9 432 aa12.51□□□□□ -0.41
COL4A3-202ENST00000396578 ALKBH3Q96Q83 286 aaPredicted RBP12.51□□□□□ -0.41
COL4A3-202ENST00000396578 PCDHGA9Q9Y5G4 932 aaKnown RBP12.51□□□□□ -0.41
COL4A3-202ENST00000396578 TCRBV5S1A1TA0A578 114 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 H0Y8X5 98 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 ST6GAL1P15907 406 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 FGF9P31371 208 aaPredicted RBP12.5□□□□□ -0.41
COL4A3-202ENST00000396578 RPL30P62888 115 aaKnown RBP12.5□□□□□ -0.41
COL4A3-202ENST00000396578 DMRTC1Q5HYR2 192 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 SLC16A13Q7RTY0 426 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 OR2C3Q8N628 320 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 IL36GQ9NZH8 169 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 BTAF1O14981 1849 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 PKIAP61925 76 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 HLA-DRB3P79483 266 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 MYBPHQ13203 477 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 SNX22Q96L94 193 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 RHNO1Q9BSD3 238 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 SRD5A3Q9H8P0 318 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 ERRFI1Q9UJM3 462 aaPredicted RBP12.5□□□□□ -0.41
COL4A3-202ENST00000396578 CTAG2O75638 210 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 SRSF9Q13242 221 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL4A3-202ENST00000396578 GAMTQ14353 236 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms