RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 AJUBAQ96IF1 538 aa14.94□□□□□ -0.02
FXN-203ENST00000396366 RBM4BQ9BQ04 359 aaKnown RBP14.94□□□□□ -0.02
FXN-203ENST00000396366 HES4Q9HCC6 221 aa14.94□□□□□ -0.02
FXN-203ENST00000396366 AASSQ9UDR5 926 aa14.94□□□□□ -0.02
FXN-203ENST00000396366 CAB39Q9Y376 341 aaPredicted RBP14.94□□□□□ -0.02
FXN-203ENST00000396366 RNF114Q9Y508 228 aa14.94□□□□□ -0.02
FXN-203ENST00000396366 TRBV23-1A0A0A0MS06 115 aa14.93□□□□□ -0.02
FXN-203ENST00000396366 DHRS7CA6NNS2 312 aa14.93□□□□□ -0.02
FXN-203ENST00000396366 H3BNX3 289 aa14.93□□□□□ -0.02
FXN-203ENST00000396366 SLC1A7O00341 560 aa14.93□□□□□ -0.02
FXN-203ENST00000396366 SULT1C4O75897 302 aa14.93□□□□□ -0.02
FXN-203ENST00000396366 MPZP25189 248 aa14.93□□□□□ -0.02
FXN-203ENST00000396366 KIR3DL2P43630 455 aa14.93□□□□□ -0.02
FXN-203ENST00000396366 ERVK11-1P61568 191 aa14.93□□□□□ -0.02
FXN-203ENST00000396366 ZIK1Q3SY52 487 aaPredicted RBP14.93□□□□□ -0.02
FXN-203ENST00000396366 NCR3LG1Q68D85 454 aa14.93□□□□□ -0.02
FXN-203ENST00000396366 ZNF561Q8N587 486 aa14.93□□□□□ -0.02
FXN-203ENST00000396366 ZSCAN4Q8NAM6 433 aaPredicted RBP14.93□□□□□ -0.02
FXN-203ENST00000396366 MTCH1Q9NZJ7 389 aa14.93□□□□□ -0.02
FXN-203ENST00000396366 GNG8Q9UK08 70 aa14.93□□□□□ -0.02
FXN-203ENST00000396366 POLDIP2Q9Y2S7 368 aa14.93□□□□□ -0.02
FXN-203ENST00000396366 MEX3AA1L020 520 aaKnown RBP14.92□□□□□ -0.02
FXN-203ENST00000396366 KCNAB3O43448 404 aa14.92□□□□□ -0.02
FXN-203ENST00000396366 ANGPTL7O43827 346 aa14.92□□□□□ -0.02
FXN-203ENST00000396366 ENTPD6O75354 484 aa14.92□□□□□ -0.02
FXN-203ENST00000396366 PAHP00439 452 aa14.92□□□□□ -0.02
FXN-203ENST00000396366 ALPLP05186 524 aa14.92□□□□□ -0.02
FXN-203ENST00000396366 CCL3L1P16619 93 aa14.92□□□□□ -0.02
FXN-203ENST00000396366 CDC42P60953 191 aa14.92□□□□□ -0.02
FXN-203ENST00000396366 RPL15P61313 204 aaKnown RBP14.92□□□□□ -0.02
FXN-203ENST00000396366 RPL31P62899 125 aaKnown RBP14.92□□□□□ -0.02
FXN-203ENST00000396366 KPNB1Q14974 876 aaKnown RBP14.92□□□□□ -0.02
FXN-203ENST00000396366 GDPGP1Q6ZNW5 385 aa14.92□□□□□ -0.02
FXN-203ENST00000396366 CITED1Q99966 193 aa14.92□□□□□ -0.02
FXN-203ENST00000396366 PLEKHA1Q9HB21 404 aa14.92□□□□□ -0.02
FXN-203ENST00000396366 VPREB3Q9UKI3 123 aa14.92□□□□□ -0.02
FXN-203ENST00000396366 EI24O14681 340 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 TK1P04183 234 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 PIPP12273 146 aaPredicted RBP14.91□□□□□ -0.02
FXN-203ENST00000396366 ISL1P61371 349 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 ACSM1Q08AH1 577 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 IL24Q13007 206 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 TMED1Q13445 227 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 ZNF273Q14593 569 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 BRICD5Q6PL45 260 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 OR5D13Q8NGL4 314 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 RFKQ969G6 155 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 SLAMF9Q96A28 289 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 ADI1Q9BV57 179 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 PKIBQ9C010 78 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 SLC7A11Q9UPY5 501 aa14.91□□□□□ -0.02
FXN-203ENST00000396366 SF3B6Q9Y3B4 125 aaKnown RBP14.91□□□□□ -0.02
FXN-203ENST00000396366 LOC107986453A0A1B0GWG9 222 aa14.9□□□□□ -0.02
FXN-203ENST00000396366 J3QRE1 110 aa14.9□□□□□ -0.02
FXN-203ENST00000396366 PROK1P58294 105 aa14.9□□□□□ -0.02
FXN-203ENST00000396366 NANOS3P60323 173 aaKnown RBP14.9□□□□□ -0.02
FXN-203ENST00000396366 COL10A1Q03692 680 aa14.9□□□□□ -0.02
FXN-203ENST00000396366 DHRS7BQ6IAN0 325 aaPredicted RBP14.9□□□□□ -0.02
FXN-203ENST00000396366 BEND2Q8NDZ0 799 aa14.9□□□□□ -0.02
FXN-203ENST00000396366 RNFT2Q96EX2 444 aa14.9□□□□□ -0.02
FXN-203ENST00000396366 HRASLS5Q96KN8 279 aa14.9□□□□□ -0.02
FXN-203ENST00000396366 CHST5Q9GZS9 411 aa14.9□□□□□ -0.02
FXN-203ENST00000396366 IMPAD1Q9NX62 359 aa14.9□□□□□ -0.02
FXN-203ENST00000396366 BTBD17A6NE02 478 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 E9PQ18 207 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 H3BUX3 64 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 COX7A1P24310 79 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 FUT6P51993 359 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 OR12D2P58182 307 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 LY6EQ16553 131 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 ZNF782Q6ZMW2 699 aaPredicted RBP14.89□□□□□ -0.03
FXN-203ENST00000396366 SLC25A26Q70HW3 274 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 ASCC1Q8N9N2 400 aaKnown RBP14.89□□□□□ -0.03
FXN-203ENST00000396366 OR2G2Q8NGZ5 317 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 PPP1R35Q8TAP8 253 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 TRUB1Q8WWH5 349 aaKnown RBP14.89□□□□□ -0.03
FXN-203ENST00000396366 ADAT3Q96EY9 351 aaPredicted RBP14.89□□□□□ -0.03
FXN-203ENST00000396366 CEP19Q96LK0 163 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 SSX3Q99909 188 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 PPA2Q9H2U2 334 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 C16orf95Q9H693 158 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 USE1Q9NZ43 259 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 FRRS1LQ9P0K9 344 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 IL36RNQ9UBH0 155 aa14.89□□□□□ -0.03
FXN-203ENST00000396366 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.89□□□□□ -0.03
FXN-203ENST00000396366 WNK1Q9H4A3 2382 aa14.88□□□□□ -0.03
FXN-203ENST00000396366 IGKV1-9A0A0C4DH69 117 aa14.88□□□□□ -0.03
FXN-203ENST00000396366 K7N7A8 449 aa14.88□□□□□ -0.03
FXN-203ENST00000396366 ZNF737O75373 536 aa14.88□□□□□ -0.03
FXN-203ENST00000396366 CLPXO76031 633 aa14.88□□□□□ -0.03
FXN-203ENST00000396366 CALCBP10092 127 aa14.88□□□□□ -0.03
FXN-203ENST00000396366 ALDH3A2P51648 485 aa14.88□□□□□ -0.03
FXN-203ENST00000396366 BMXP51813 675 aa14.88□□□□□ -0.03
FXN-203ENST00000396366 DLX6P56179 175 aa14.88□□□□□ -0.03
FXN-203ENST00000396366 SNRPGP62308 76 aaKnown RBP14.88□□□□□ -0.03
FXN-203ENST00000396366 MIDNQ504T8 468 aa14.88□□□□□ -0.03
FXN-203ENST00000396366 ASPHD2Q6ICH7 369 aa14.88□□□□□ -0.03
FXN-203ENST00000396366 SLC35E4Q6ICL7 350 aa14.88□□□□□ -0.03
FXN-203ENST00000396366 RNF144BQ7Z419 303 aa14.88□□□□□ -0.03
FXN-203ENST00000396366 FAM220AQ7Z4H9 259 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms