RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 PDZD9Q8IXQ8 264 aa14.52□□□□□ -0.08
NUP50-202ENST00000396096 ZFP62Q8NB50 900 aaPredicted RBP14.52□□□□□ -0.08
NUP50-202ENST00000396096 Q8NFD4 153 aa14.52□□□□□ -0.08
NUP50-202ENST00000396096 PIGCQ92535 297 aa14.52□□□□□ -0.08
NUP50-202ENST00000396096 APH1AQ96BI3 265 aa14.52□□□□□ -0.08
NUP50-202ENST00000396096 PHYHIPLQ96FC7 376 aa14.52□□□□□ -0.08
NUP50-202ENST00000396096 HDHD3Q9BSH5 251 aaPredicted RBP14.52□□□□□ -0.08
NUP50-202ENST00000396096 REPIN1Q9BWE0 567 aaKnown RBP14.52□□□□□ -0.08
NUP50-202ENST00000396096 C14orf166Q9Y224 244 aaKnown RBP14.52□□□□□ -0.08
NUP50-202ENST00000396096 C13orf42A0A1B0GVH6 325 aa14.52□□□□□ -0.09
NUP50-202ENST00000396096 CRYZL1O95825 349 aa14.52□□□□□ -0.09
NUP50-202ENST00000396096 CTSDP07339 412 aaPredicted RBP14.52□□□□□ -0.09
NUP50-202ENST00000396096 LYL1P12980 280 aa14.52□□□□□ -0.09
NUP50-202ENST00000396096 PI3P19957 117 aa14.52□□□□□ -0.09
NUP50-202ENST00000396096 ARPC4P59998 168 aa14.52□□□□□ -0.09
NUP50-202ENST00000396096 INO80EQ8NBZ0 244 aaPredicted RBP14.52□□□□□ -0.09
NUP50-202ENST00000396096 OR1S1Q8NH92 325 aa14.52□□□□□ -0.09
NUP50-202ENST00000396096 SULT4A1Q9BR01 284 aa14.52□□□□□ -0.09
NUP50-202ENST00000396096 RASL12Q9NYN1 266 aa14.52□□□□□ -0.09
NUP50-202ENST00000396096 PFDN2Q9UHV9 154 aa14.52□□□□□ -0.09
NUP50-202ENST00000396096 MED13Q9UHV7 2174 aa14.52□□□□□ -0.09
NUP50-202ENST00000396096 SS18L1O75177 396 aaPredicted RBP14.51□□□□□ -0.09
NUP50-202ENST00000396096 PLATP00750 562 aa14.51□□□□□ -0.09
NUP50-202ENST00000396096 FCGR3AP08637 254 aa14.51□□□□□ -0.09
NUP50-202ENST00000396096 PPIAP62937 165 aaKnown RBP14.51□□□□□ -0.09
NUP50-202ENST00000396096 PLEKHN1Q494U1 663 aaPredicted RBP14.51□□□□□ -0.09
NUP50-202ENST00000396096 OR10AD1Q8NGE0 317 aa14.51□□□□□ -0.09
NUP50-202ENST00000396096 LRRC20Q8TCA0 184 aa14.51□□□□□ -0.09
NUP50-202ENST00000396096 DMRTA2Q96SC8 542 aa14.51□□□□□ -0.09
NUP50-202ENST00000396096 CMSS1Q9BQ75 279 aaKnown RBP14.51□□□□□ -0.09
NUP50-202ENST00000396096 ZNF2Q9BSG1 426 aaPredicted RBP14.51□□□□□ -0.09
NUP50-202ENST00000396096 RNF126Q9BV68 326 aa14.51□□□□□ -0.09
NUP50-202ENST00000396096 PRRG4Q9BZD6 226 aa14.51□□□□□ -0.09
NUP50-202ENST00000396096 KCNMB2Q9Y691 235 aa14.51□□□□□ -0.09
NUP50-202ENST00000396096 TNRC6AQ8NDV7 1962 aaKnown RBP14.51□□□□□ -0.09
NUP50-202ENST00000396096 BDP1A6H8Y1 2624 aa14.51□□□□□ -0.09
NUP50-202ENST00000396096 GEMIN2O14893 280 aaKnown RBP14.5□□□□□ -0.09
NUP50-202ENST00000396096 SFTPBP07988 381 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 PGAM2P15259 253 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 ARR3P36575 388 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 ATXN7L3Q14CW9 347 aaPredicted RBP14.5□□□□□ -0.09
NUP50-202ENST00000396096 C1QTNF12Q5T7M4 302 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 DHRS11Q6UWP2 260 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 FBXL14Q8N1E6 418 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 EIF4E3Q8N5X7 224 aaKnown RBP14.5□□□□□ -0.09
NUP50-202ENST00000396096 OR51F2Q8NH61 342 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 NECAP2Q9NVZ3 263 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 ZNF581Q9P0T4 197 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 NUP50Q9UKX7 468 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 CSAG2Q9Y5P2 127 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 FREM1Q5H8C1 2179 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 NCOR1O75376 2440 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 A0A096LPE4 126 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 TEX13DA0A0J9YY54 714 aaPredicted RBP14.5□□□□□ -0.09
NUP50-202ENST00000396096 A0A1W2PPZ6 126 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 PQLC2LA1A4F0 135 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 POM121CA8CG34 1229 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 PDCD6O75340 191 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 ADAP1O75689 374 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 HLA-HP01893 362 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 CD46P15529 392 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 PTGER4P35408 488 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 FOXG1P55316 489 aaPredicted RBP14.5□□□□□ -0.09
NUP50-202ENST00000396096 RBM11P57052 281 aaKnown RBP14.5□□□□□ -0.09
NUP50-202ENST00000396096 SOX8P57073 446 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 IL15RAQ13261 267 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 SLC10A1Q14973 349 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 PIGYQ3MUY2 71 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 HSD17B13Q7Z5P4 300 aaPredicted RBP14.5□□□□□ -0.09
NUP50-202ENST00000396096 IL22RA1Q8N6P7 574 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 APOBEC3DQ96AK3 386 aaPredicted RBP14.5□□□□□ -0.09
NUP50-202ENST00000396096 C2orf50Q96LR7 162 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 ARPC5LQ9BPX5 153 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 ST3GAL6Q9Y274 331 aa14.5□□□□□ -0.09
NUP50-202ENST00000396096 ARHGAP21Q5T5U3 1957 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A10PA6NDY2 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A18PA6NE21 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A16PA6NEW6 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A20PA6NIJ5 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A8PA6NJQ4 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A7PA6NKC0 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 ZNF850A8MQ14 1090 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A22PA8MWA6 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A12PA8MX19 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A5PA8MXJ8 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 A8MXK9 166 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A23PA8MXZ1 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 CST4P01036 141 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FGF2P09038 288 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A15PP0C7V4 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A13PP0C7W8 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A14PP0C7W9 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 FAM90A24PP0C7X0 464 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 OR5H8P0DN80 308 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 ZP3P21754 424 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 LUMP51884 338 aaPredicted RBP14.49□□□□□ -0.09
NUP50-202ENST00000396096 PRSS54Q6PEW0 395 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 GLRX5Q86SX6 157 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 SAXO1Q8IYX7 474 aa14.49□□□□□ -0.09
NUP50-202ENST00000396096 POC1AQ8NBT0 407 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms