RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 HELZP42694 1942 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 SVILO95425 2214 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 RIF1Q5UIP0 2472 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 TRAV34A0A0B4J273 112 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 A0A1B0GWJ7 208 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 C9orf170A2RU37 121 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ZNF727A8MUV8 499 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 C21orf140B9A014 251 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 METTL15P1P0C7V9 234 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 RCC1P18754 421 aaPredicted RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 HNRNPA3P51991 378 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 PCBD1P61457 104 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 HIST1H3AP68431 136 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 NAAAQ02083 359 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 RAB32Q13637 225 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ZNF266Q14584 549 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 MEP1BQ16820 701 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 C2orf68Q2NKX9 166 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 KHDC3LQ587J8 217 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 LEMD1Q68G75 181 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 MEX3BQ6ZN04 569 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 ZFP62Q8NB50 900 aaPredicted RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 TMEM229BQ8NBD8 167 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 OR10AD1Q8NGE0 317 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 OR8U1Q8NH10 309 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 OXGR1Q96P68 337 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 C2orf88Q9BSF0 95 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 MRPL37Q9BZE1 423 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 ARV1Q9H2C2 271 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 GPR27Q9NS67 375 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 MRPS18AQ9NVS2 196 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 FKBP11Q9NYL4 201 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 GNG13Q9P2W3 67 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 DNAJB11Q9UBS4 358 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 CEP350Q5VT06 3117 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 COL4A4P53420 1690 aaPredicted RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 CENPVL1A0A0U1RR11 272 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 PRSS37A4D1T9 235 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 FAM166BA8MTA8 275 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 GPR137BO60478 399 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ADAP1O75689 374 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 GUSBP08236 651 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 HRH1P35367 487 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 CD96P40200 585 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ACAA2P42765 397 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 HTR5AP47898 357 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 UBE2NP61088 152 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 SRSF3P84103 164 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 SSBP1Q04837 148 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 MALLQ13021 153 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 IL10RAQ13651 578 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 TMEM183BQ1AE95 376 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 PRSS54Q6PEW0 395 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ADGRE4PQ86SQ3 457 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ATG4DQ86TL0 474 aaPredicted RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 ZADH2Q8N4Q0 377 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 NANOS1Q8WY41 292 aaKnown RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 HOXB13Q92826 284 aaPredicted RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 IL22RA2Q969J5 263 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 SYT3Q9BQG1 590 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 KLHL13Q9P2N7 655 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 ICAM5Q9UMF0 924 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 UBE2J1Q9Y385 318 aaPredicted RBP5.05□□□□□ -1.6
RFFL-202ENST00000394597 ALPK2Q86TB3 2170 aa5.05□□□□□ -1.6
RFFL-202ENST00000394597 DSPPQ9NZW4 1301 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 LNP1A1A4G5 178 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 RNF212BA8MTL3 300 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 CEBPZOSA8MTT3 80 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 CDRT15L2A8MXV6 281 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 LCATP04180 440 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 SUMO1P63165 101 aaKnown RBP5.04□□□□□ -1.6
RFFL-202ENST00000394597 TMEM255AQ5JRV8 349 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 THEM4Q5T1C6 240 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 ZNF770Q6IQ21 691 aaPredicted RBP5.04□□□□□ -1.6
RFFL-202ENST00000394597 ANKRD16Q6P6B7 361 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.04□□□□□ -1.6
RFFL-202ENST00000394597 FJX1Q86VR8 437 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 ZNF709Q8N972 641 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 SLC26A10Q8NG04 563 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 BTF3L4Q96K17 158 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 TSSK2Q96PF2 358 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 PARP11Q9NR21 331 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 FBXL17Q9UF56 701 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 GBF1Q92538 1859 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 LOC102725191A0A1B0GVB3 256 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 FTCDNL1E5RQL4 147 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 H3BQ15 152 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 GALR2O43603 387 aaPredicted RBP5.04□□□□□ -1.6
RFFL-202ENST00000394597 TMEM127O75204 238 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 FOLR2P14207 255 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 MDKP21741 143 aaPredicted RBP5.04□□□□□ -1.6
RFFL-202ENST00000394597 ACP1P24666 158 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 FOXL2P58012 376 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 PAX5Q02548 391 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 MFGE8Q08431 387 aaPredicted RBP5.04□□□□□ -1.6
RFFL-202ENST00000394597 DMKNQ6E0U4 476 aaPredicted RBP5.04□□□□□ -1.6
RFFL-202ENST00000394597 THSD4Q6ZMP0 1018 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 LINC00346Q8IVM7 164 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 CMTM1Q8IZ96 169 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 OR13C8Q8NGS7 320 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms