RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 RAB3DO95716 219 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 HNRNPCP07910 306 aaKnown RBP eCLIP7.39□□□□□ -1.23
TDP1-203ENST00000393454 H2AFB2P0C5Z0 115 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 TATDN3Q17R31 274 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 PNLIPRP3Q17RR3 467 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 C3orf36Q3SXR2 165 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 AGAP6Q5VW22 663 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 VHLLQ6RSH7 139 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 C22orf34Q6ZV56 151 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 C6orf201Q7Z4U5 140 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 C1orf174Q8IYL3 243 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 TMEM229BQ8NBD8 167 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 OR4S1Q8NGB4 309 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 OR4D10Q8NGI6 311 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 OR56B4Q8NH76 319 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 CYYR1Q96J86 154 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 USB1Q9BQ65 265 aaKnown RBP7.39□□□□□ -1.23
TDP1-203ENST00000393454 IL36GQ9NZH8 169 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 DUSP13Q9UII6 198 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 KCNK7Q9Y2U2 307 aa7.39□□□□□ -1.23
TDP1-203ENST00000393454 ITPR1Q14643 2758 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.38□□□□□ -1.23
TDP1-203ENST00000393454 H0YL77 283 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 M0QYG6 137 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 ERVH48-1M5A8F1 160 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 MFNGO00587 321 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 SYNGR1O43759 233 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 DHFRP00374 187 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 CSN2P05814 226 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 GRPP07492 148 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 CCKARP32238 428 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 ARL6IP1Q15041 203 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 PDCD1Q15116 288 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 OR52W1Q6IF63 320 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 BTN2A1Q7KYR7 527 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 ZNF554Q86TJ5 538 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 SAXO1Q8IYX7 474 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 OR8G5Q8NG78 346 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 OR10AD1Q8NGE0 317 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 DEDD2Q8WXF8 326 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 HPS1Q92902 700 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 DACT3Q96B18 629 aaPredicted RBP7.38□□□□□ -1.23
TDP1-203ENST00000393454 MRPS24Q96EL2 167 aaKnown RBP7.38□□□□□ -1.23
TDP1-203ENST00000393454 FAAP24Q9BTP7 215 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 OR10A4Q9H209 315 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 MTCH1Q9NZJ7 389 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 POU2F3Q9UKI9 436 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 ALG5Q9Y673 324 aa7.38□□□□□ -1.23
TDP1-203ENST00000393454 FAM90A27PA6NNH2 459 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 FOXI3A8MTJ6 420 aaPredicted RBP7.37□□□□□ -1.23
TDP1-203ENST00000393454 ATP6V1G2-DDX39BF2Z307 99 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 AMY2AP04746 511 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 PRKACAP17612 351 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 KITLGP21583 273 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 RBM11P57052 281 aaKnown RBP7.37□□□□□ -1.23
TDP1-203ENST00000393454 BTG1P62324 171 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 MRPS15P82914 257 aaKnown RBP7.37□□□□□ -1.23
TDP1-203ENST00000393454 NKPD1Q17RQ9 610 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 ATAD3CQ5T2N8 411 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 MBNL2Q5VZF2 373 aaKnown RBP7.37□□□□□ -1.23
TDP1-203ENST00000393454 BRICD5Q6PL45 260 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 OR51S1Q8NGJ8 323 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 ZNF488Q96MN9 340 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 NEURL2Q9BR09 285 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 ST6GALNAC5Q9BVH7 336 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 BEX2Q9BXY8 128 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 TINAGL1Q9GZM7 467 aaPredicted RBP7.37□□□□□ -1.23
TDP1-203ENST00000393454 C20orf85Q9H1P6 137 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 OR51I2Q9H344 312 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 BEX1Q9HBH7 125 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 MSL2Q9HCI7 577 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 ZNF581Q9P0T4 197 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 FLVCR2Q9UPI3 526 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 COL6A6A6NMZ7 2263 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 PKD1L2Q7Z442 2459 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 POLEQ07864 2286 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 A0A0B4J293 547 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 LRP5LA4QPB2 252 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 SERPINE3A8MV23 424 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 F8VVB4 439 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 F8VWA3 439 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 J3QT63 122 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 AKR7A2O43488 359 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 OR7C1O76099 320 aaPredicted RBP7.37□□□□□ -1.23
TDP1-203ENST00000393454 CD40P25942 277 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 GLRXP35754 106 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 CBX5P45973 191 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 GMFBP60983 142 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 SCGB2B2Q4G0G5 96 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 RNASE10Q5GAN6 216 aaKnown RBP7.37□□□□□ -1.23
TDP1-203ENST00000393454 C1QTNF12Q5T7M4 302 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 SIGIRRQ6IA17 410 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 TMEM108Q6UXF1 575 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 AKAP14Q86UN6 197 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 TMEM200AQ86VY9 491 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 LRP11Q86VZ4 500 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 BPIFB2Q8N4F0 458 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 SCCPDHQ8NBX0 429 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 OR13G1Q8NGZ3 307 aa7.37□□□□□ -1.23
TDP1-203ENST00000393454 ST8SIA4Q92187 359 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms