RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 CA5BP1Q8WTZ4 195 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 CLDN23Q96B33 292 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 SOX7Q9BT81 388 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 METTL7AQ9H8H3 244 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 SDHAF3Q9NRP4 125 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 SERINC1Q9NRX5 453 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 C19orf12Q9NSK7 152 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 EML6Q6ZMW3 1958 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 ZNF726A6NNF4 738 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 ZNF814B7Z6K7 855 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 MASP2O00187 686 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 HIST1H1BP16401 226 aaKnown RBP15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 FPR2P25090 351 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 PTGDSP41222 190 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 CSNK2A1P68400 391 aaPredicted RBP15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 SSX2Q16385 188 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 CARD17Q5XLA6 110 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 CSNK2A3Q8NEV1 391 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 C11orf40Q8WZ69 217 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 DDIT4LQ96D03 193 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 WFDC1Q9HC57 220 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 B3GAT1Q9P2W7 334 aa15.51■□□□□ 0.07
SQSTM1-202ENST00000389805 SYT7O43581 403 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 RPS2P15880 293 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 CDAP32320 146 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 TMEM50BP56557 158 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 FAM3AP98173 230 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 PCK2Q16822 640 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 PRAMEF20Q5VT98 475 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 CYB5R2Q6BCY4 276 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 COMMD2Q86X83 199 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 NTNG2Q96CW9 530 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 SSX3Q99909 188 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 LUZP4Q9P127 313 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 BTBD17A6NE02 478 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 SLC31A2O15432 143 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 BPNT1O95861 308 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 FABP4P15090 132 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 TBPP20226 339 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 DDTP30046 118 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 SFTPDP35247 375 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 PTGER4P35408 488 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 RBMXP38159 391 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 DAP3P51398 398 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 ZP4Q12836 540 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 C4orf17Q53FE4 359 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 LYSMD4Q5XG99 296 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 OPN5Q6U736 354 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 FAM213BQ8TBF2 198 aa15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 MRPL24Q96A35 216 aaKnown RBP15.5■□□□□ 0.07
SQSTM1-202ENST00000389805 EXPH5Q8NEV8 1989 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 DIRAS3O95661 229 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 F10P00742 488 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 H2BFMP0C1H6 154 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 DANCRP0C864 163 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 ANOS1P23352 680 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 OR3A4PP47883 348 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 ZNF41P51814 821 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 KHDC3LQ587J8 217 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 ZNF385CQ66K41 422 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 Q7L0L9 218 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 SUMF2Q8NBJ7 301 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 SAP25Q8TEE9 199 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 Q8WTZ3 238 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 MISP3Q96FF7 219 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 URB1O60287 2271 aaKnown RBP15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 TGIF2-C20orf24A0A0A6YYL0 155 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 A6NIZ1 184 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 HIST1H2BKO60814 126 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 ZNF205O95201 554 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 HIST1H2BJP06899 126 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 SLC2A1P11166 492 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 HIST1H2BOP23527 126 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 HIST1H2BBP33778 126 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 HIST1H2BDP58876 126 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 RAP1BP61224 184 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 HIST1H2BCP62807 126 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 HIST2H2BEQ16778 126 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 HLA-BQ31612 363 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 PLPPR5Q32ZL2 321 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 TMEM182Q6ZP80 229 aaPredicted RBP15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 C1QL4Q86Z23 238 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 TMEM156Q8N614 296 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 ZNF610Q8N9Z0 462 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 OR5D18Q8NGL1 313 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 FNDC9Q8TBE3 224 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 HIST1H2BHQ93079 126 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 HIST1H2BNQ99877 126 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 HIST1H2BMQ99879 126 aa15.49■□□□□ 0.07
SQSTM1-202ENST00000389805 DEDDO75618 318 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 TRGC2P03986 189 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 HIST1H1DP16402 221 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 TAGLN2P37802 199 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 SNU13P55769 128 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 LSM6P62312 80 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 SLC35A1P78382 337 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 PLXDC2Q6UX71 529 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 DBX2Q6ZNG2 339 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 REC114Q7Z4M0 266 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms