RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 KIR2DL3P43628 341 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 SSBP1Q04837 148 aaKnown RBP12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 FBXL19-AS1Q494R0 122 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 TMEM255AQ5JRV8 349 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 PLAC9Q5JTB6 97 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 TMEM200AQ86VY9 491 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 ENKURQ8TC29 256 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 SLAMF9Q96A28 289 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 LRRC46Q96FV0 321 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 ARHGAP5-AS1Q96IT6 56 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 Q96M66 194 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 ADAT1Q9BUB4 502 aaKnown RBP12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 OR51I2Q9H344 312 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 NGBQ9NPG2 151 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 NKIRAS2Q9NYR9 191 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 DUSP13Q9UII6 198 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 LRRK2Q5S007 2527 aa12.39□□□□□ -0.43
SYNGR1-204ENST00000381535 CADP27708 2225 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 MEIS3P1A6NDR6 274 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 TMEM235A6NFC5 223 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 CYSRT1A8MQ03 144 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 FOXI3A8MTJ6 420 aaPredicted RBP12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 TRAPPC2LH3BP13 241 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 AKR7A2O43488 359 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 LPLP06858 475 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 HIST1H1DP16402 221 aaKnown RBP12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 BCL3P20749 454 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 GABRR1P24046 479 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 NPBWR2P48146 333 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 RPS23P62266 143 aaKnown RBP12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 TAF9Q16594 264 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 PNLIPRP3Q17RR3 467 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 FAM76BQ5HYJ3 339 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 HAGHLQ6PII5 290 aaPredicted RBP12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 VHLLQ6RSH7 139 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 FBXL14Q8N1E6 418 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 SPERTQ8NA61 448 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 GALNT11Q8NCW6 608 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 DUSP18Q8NEJ0 188 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 Q8NFD4 153 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 OR13G1Q8NGZ3 307 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 PRR7Q8TB68 274 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 POM121Q96HA1 1249 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 PECRQ9BY49 303 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 PKIBQ9C010 78 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 MMP28Q9H239 520 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 CXXC4Q9H2H0 198 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 HRASLSQ9HDD0 168 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 KCNJ16Q9NPI9 418 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 TAS2R8Q9NYW2 309 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 MTCH1Q9NZJ7 389 aa12.38□□□□□ -0.43
SYNGR1-204ENST00000381535 MAST4O15021 2626 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 LRP5LA4QPB2 252 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 NKX2-6A6NCS4 301 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 NAP1L6A6NFF2 107 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 SYNGR1O43759 233 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 CSF1P09603 554 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 GNG2P59768 71 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 IL24Q13007 206 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 ARL6IP1Q15041 203 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 MSMPQ1L6U9 139 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 PCGF3Q3KNV8 242 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 ELP2Q6IA86 826 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 Q6ZR03 302 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 LRP11Q86VZ4 500 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 CA5BP1Q8WTZ4 195 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 PLEKHJ1Q9NW61 149 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 NLKQ9UBE8 527 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 NDRG3Q9UGV2 375 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 ST3GAL6Q9Y274 331 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 ESPL1Q14674 2120 aa12.37□□□□□ -0.43
SYNGR1-204ENST00000381535 TMEM210A6NLX4 147 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 J3QT63 122 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 MLNRO43193 412 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 IGHV3-13P01766 116 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 MT-ND4P03905 459 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 GRPP07492 148 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 MPZP25189 248 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 SLC6A1P30531 599 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 SELENOVP59797 346 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 ACTBP60709 375 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 ACTG1P63261 375 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 ARFRP1Q13795 201 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 OLFML2AQ68BL7 652 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 PLET1Q6UQ28 207 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 TRAPPC6BQ86SZ2 158 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 WDR86Q86TI4 376 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 RTN4RL2Q86UN3 420 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 GLCCI1Q86VQ1 547 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 BATF2Q8N1L9 274 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 CELF2-AS1Q8N7Q2 184 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 TMEM229BQ8NBD8 167 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 SCCPDHQ8NBX0 429 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 NUP37Q8NFH4 326 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 TMEM171Q8WVE6 324 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 NUDCD2Q8WVJ2 157 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 PSMG3-AS1Q96PY0 264 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 DPAGT1Q9H3H5 408 aa12.36□□□□□ -0.43
SYNGR1-204ENST00000381535 MSL2Q9HCI7 577 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms