RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 GCSAMQ8N6F7 178 aa6.36□□□□□ -1.39
CCDC171-201ENST00000380701 DUSP18Q8NEJ0 188 aa6.36□□□□□ -1.39
CCDC171-201ENST00000380701 OR2M3Q8NG83 312 aa6.36□□□□□ -1.39
CCDC171-201ENST00000380701 NUDCD2Q8WVJ2 157 aa6.36□□□□□ -1.39
CCDC171-201ENST00000380701 PIMREGQ9BSJ6 248 aa6.36□□□□□ -1.39
CCDC171-201ENST00000380701 LPAR2Q9HBW0 351 aa6.36□□□□□ -1.39
CCDC171-201ENST00000380701 OR2T8A6NH00 312 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 ZNF727A8MUV8 499 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 TNFSF12O43508 249 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 CCL4P13236 92 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 MC5RP33032 325 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 CEACAM6P40199 344 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 AVPI1Q5T686 147 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM214BQ7L5A3 538 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 PILRBQ9UKJ0 227 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 PPIAL4EA0A075B759 164 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 A0A1W2PQF6 199 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 ATP6V1G2-DDX39BF2Z307 99 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 PPIAL4DF5H284 164 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 TO15178 435 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 PPIAL4FP0DN26 164 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FGF7P21781 194 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 ASCL1P50553 236 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 SLC37A1P57057 533 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 KIAA0040Q15053 153 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 OR8U1Q8NH10 309 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 TSPAN32Q96QS1 320 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 ANGPTL4Q9BY76 406 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 GSX2Q9BZM3 304 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 MS4A7Q9GZW8 240 aaPredicted RBP6.35□□□□□ -1.39
CCDC171-201ENST00000380701 ZMAT3Q9HA38 289 aaKnown RBP6.35□□□□□ -1.39
CCDC171-201ENST00000380701 TMEM165Q9HC07 324 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 PPIAL4AQ9Y536 164 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 ASB1Q9Y576 335 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 RBP4P02753 201 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 CLEC2LP0C7M8 214 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 MAGEB1P43366 347 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 SPATA46Q5T0L3 261 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 Q8WTZ3 238 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 ZNF501Q96CX3 271 aaPredicted RBP6.35□□□□□ -1.39
CCDC171-201ENST00000380701 TMEM38BQ9NVV0 291 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 ZNF586Q9NXT0 402 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 RASL12Q9NYN1 266 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 CORTO00230 105 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 IGHV4-34P06331 123 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 COX5BP10606 129 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 RAE1P78406 368 aaKnown RBP6.35□□□□□ -1.39
CCDC171-201ENST00000380701 GPNMBQ14956 572 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 ZNF770Q6IQ21 691 aaPredicted RBP6.35□□□□□ -1.39
CCDC171-201ENST00000380701 CALHM1Q8IU99 346 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 ZNF519Q8TB69 540 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 OR2H1Q9GZK4 316 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A10PA6NDY2 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A18PA6NE21 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A16PA6NEW6 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A20PA6NIJ5 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A8PA6NJQ4 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A7PA6NKC0 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A22PA8MWA6 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A12PA8MX19 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A5PA8MXJ8 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A23PA8MXZ1 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 GPX5O75715 221 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 IGF2P01344 180 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A15PP0C7V4 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A13PP0C7W8 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A14PP0C7W9 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 FAM90A24PP0C7X0 464 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 CD37P11049 281 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 OPRK1P41145 380 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 CTDSP1Q9GZU7 261 aa6.35□□□□□ -1.39
CCDC171-201ENST00000380701 DUS4LO95620 317 aaKnown RBP6.34□□□□□ -1.39
CCDC171-201ENST00000380701 IGFBP1P08833 259 aaPredicted RBP6.34□□□□□ -1.39
CCDC171-201ENST00000380701 HIST1H1EP10412 219 aaKnown RBP6.34□□□□□ -1.39
CCDC171-201ENST00000380701 MAGEA5P43359 124 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 LPAR6P43657 344 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 PCBP3P57721 371 aaKnown RBP6.34□□□□□ -1.39
CCDC171-201ENST00000380701 DDX60LQ5H9U9 1706 aaKnown RBP6.34□□□□□ -1.39
CCDC171-201ENST00000380701 DYNLRB2Q8TF09 96 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 ACY3Q96HD9 319 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 SH3BGRL3Q9H299 93 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 SH2D2AQ9NP31 389 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 PSG11Q9UQ72 335 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 A0A1W2PS18 150 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 TRDCB7Z8K6 153 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 OR3A4PP47883 348 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 YBX1P67809 324 aaKnown RBP6.34□□□□□ -1.39
CCDC171-201ENST00000380701 WDR38Q5JTN6 314 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 TMEM182Q6ZP80 229 aaPredicted RBP6.34□□□□□ -1.39
CCDC171-201ENST00000380701 ZNF788Q6ZQV5 615 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 SH2D5Q6ZV89 423 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 TTTY12Q9BZ98 90 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 CYR61O00622 381 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 CFDP00746 253 aaPredicted RBP6.34□□□□□ -1.39
CCDC171-201ENST00000380701 CTSDP07339 412 aaPredicted RBP6.34□□□□□ -1.39
CCDC171-201ENST00000380701 MYF5P13349 255 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 TMEM11P17152 192 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 CDAP32320 146 aa6.34□□□□□ -1.39
CCDC171-201ENST00000380701 RPL13AP40429 203 aaKnown RBP6.34□□□□□ -1.39
CCDC171-201ENST00000380701 ANKRD34AQ69YU3 496 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms