RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 RECKO95980 971 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 DSCR4P56555 118 aaPredicted RBP7.77□□□□□ -1.17
PCDH9-202ENST00000377865 LSM6P62312 80 aaKnown RBP7.77□□□□□ -1.17
PCDH9-202ENST00000377865 TMEM241Q24JQ0 296 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 NCMAPQ5T1S8 102 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 C6orf201Q7Z4U5 140 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 MS4A3Q96HJ5 214 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 TAAR9Q96RI9 348 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 CRLF2Q9HC73 371 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 OBP2BQ9NPH6 170 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 NAT8Q9UHE5 227 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 PILRAQ9UKJ1 303 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 OSGIN2Q9Y236 505 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 DNASE2O00115 360 aaPredicted RBP7.77□□□□□ -1.17
PCDH9-202ENST00000377865 SLC37A1P57057 533 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 TBC1D28Q2M2D7 210 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 SP6Q3SY56 376 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 ANAPC16Q96DE5 110 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 GPR132Q9UNW8 380 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 ZNF638Q14966 1978 aaKnown RBP7.77□□□□□ -1.17
PCDH9-202ENST00000377865 FAM24AA6NFZ4 105 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 EFSO43281 561 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 PDCD6O75340 191 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 CDS2O95674 445 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 IGHMP01871 453 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 IAPPP10997 89 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 LIMK1P53667 647 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 RPS4XP62701 263 aaKnown RBP7.77□□□□□ -1.17
PCDH9-202ENST00000377865 TMEM52Q8NDY8 209 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 CORO2AQ92828 525 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 VN1R1Q9GZP7 353 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 Q9N2K0 584 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 ZNF586Q9NXT0 402 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 FAM221AA4D161 298 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 SPINT2O43291 252 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 SEMA7AO75326 666 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 FAM157BP0CG42 384 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 DLK1P80370 383 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 TEX30Q5JUR7 227 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 ZNF383Q8NA42 475 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 MTCH2Q9Y6C9 303 aa7.77□□□□□ -1.17
PCDH9-202ENST00000377865 ZNF646O15015 1829 aaPredicted RBP7.76□□□□□ -1.17
PCDH9-202ENST00000377865 LIPT2A6NK58 231 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 G3V3Q6 166 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 DXOO77932 396 aaKnown RBP7.76□□□□□ -1.17
PCDH9-202ENST00000377865 ARG1P05089 322 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 PTGER4P35408 488 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 ZNF90Q03938 601 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 ZNF574Q6ZN55 896 aaPredicted RBP7.76□□□□□ -1.17
PCDH9-202ENST00000377865 DBX2Q6ZNG2 339 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 AGBL5Q8NDL9 886 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 MRPL24Q96A35 216 aaKnown RBP7.76□□□□□ -1.17
PCDH9-202ENST00000377865 SPACA9Q96E40 222 aaPredicted RBP7.76□□□□□ -1.17
PCDH9-202ENST00000377865 ZNF845Q96IR2 970 aaPredicted RBP7.76□□□□□ -1.17
PCDH9-202ENST00000377865 FAAP24Q9BTP7 215 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 ADAT1Q9BUB4 502 aaKnown RBP7.76□□□□□ -1.17
PCDH9-202ENST00000377865 PPP1R3CQ9UQK1 317 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 KCNK7Q9Y2U2 307 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 XKRY2A2RUG3 117 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 HS3ST1O14792 307 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 SH2D1BO14796 132 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 RER1O15258 196 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 EIF3GO75821 320 aaKnown RBP eCLIP7.76□□□□□ -1.17
PCDH9-202ENST00000377865 IL2RAP01589 272 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 MDH2P40926 338 aaKnown RBP7.76□□□□□ -1.17
PCDH9-202ENST00000377865 EWSR1Q01844 656 aaKnown RBP eCLIP7.76□□□□□ -1.17
PCDH9-202ENST00000377865 LINC01590Q5TEZ4 76 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 GLRX5Q86SX6 157 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 ISOC2Q96AB3 205 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 RAB33BQ9H082 229 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 HEXA-AS1Q9H8Q6 139 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 MANBALQ9NQG1 85 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 PISDQ9UG56 409 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 KCNE5Q9UJ90 142 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 CHD5Q8TDI0 1954 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 TRDCB7Z8K6 153 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 CST7O76096 145 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 HKR1P10072 659 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 GLI4P10075 376 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 MMP9P14780 707 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 ATP6V1FQ16864 119 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 Q3ZCU0 254 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 FAM162BQ5T6X4 162 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 NR2C2APQ86WQ0 139 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 CLDN23Q96B33 292 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 NOL4LQ96MY1 436 aaPredicted RBP7.76□□□□□ -1.17
PCDH9-202ENST00000377865 GPR87Q9BY21 358 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 ANKRD10Q9NXR5 420 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 OR5AC2Q9NZP5 309 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 A0A1W2PPQ1 181 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 OR2W5A6NFC9 320 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 H3BQ15 152 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 SPINT1O43278 529 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 DYNLT3P51808 116 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 HIST1H3AP68431 136 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 FAM209BQ5JX69 171 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 SLC25A26Q70HW3 274 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 FBXL14Q8N1E6 418 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 SIGLECL1Q8N7X8 197 aa7.76□□□□□ -1.17
PCDH9-202ENST00000377865 SLC35G3Q8N808 338 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms