RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 MRPS18BQ9Y676 258 aaKnown RBP9.64□□□□□ -0.87
HIF3A-205ENST00000377670 ABCA7Q8IZY2 2146 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 TRAV38-1A0A0B4J264 116 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 TERTO14746 1132 aaKnown RBP9.64□□□□□ -0.87
HIF3A-205ENST00000377670 CTRB1P17538 263 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 ADRA2CP18825 462 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 VMA21Q3ZAQ7 101 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 EMC4Q5J8M3 183 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 CTRB2Q6GPI1 263 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 TFAP2EQ6VUC0 442 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 LRRTM1Q86UE6 522 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 SPICQ8N5J4 248 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 ARIH2OSQ8N7S6 290 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 JAM3Q9BX67 310 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 FLVCR1Q9Y5Y0 555 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 ZNF528Q3MIS6 628 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 ZNF787Q6DD87 383 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 LYG2Q86SG7 212 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 NPEPL1Q8NDH3 523 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 OR4C16Q8NGL9 310 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 OR10D4PQ8NGN7 298 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 MARCH1Q8TCQ1 289 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 DYNLRB2Q8TF09 96 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 SEC14L6B5MCN3 397 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 CT62P0C5K7 136 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 KRTDAPP60985 99 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 TGIF1Q15583 401 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 ZNF658BQ4V348 819 aaPredicted RBP9.64□□□□□ -0.87
HIF3A-205ENST00000377670 NOXO1Q8NFA2 376 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 OR2AE1Q8NHA4 323 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 GNPNAT1Q96EK6 184 aaPredicted RBP9.64□□□□□ -0.87
HIF3A-205ENST00000377670 PRO1933Q9H354 126 aa9.64□□□□□ -0.87
HIF3A-205ENST00000377670 PIKFYVEQ9Y2I7 2098 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 LNP1A1A4G5 178 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 RNASEK-C17orf49H0YIS7 233 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 NAAAQ02083 359 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 A0A1W2PPQ1 181 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 CTXN2P0C2S0 81 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 FAM27D1Q5T7N8 215 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 STAC2Q6ZMT1 411 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 SLC24A4Q8NFF2 622 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 ZNF596Q8TC21 504 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 GAL3ST2Q9H3Q3 398 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 PYCARD-AS1I3L0S3 204 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 SLC31A2O15432 143 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 OR4A8P0C604 315 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 RPL18Q07020 188 aaKnown RBP9.63□□□□□ -0.87
HIF3A-205ENST00000377670 TMEM81Q6P7N7 255 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 SMIM19Q96E16 107 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 C19orf43Q9BQ61 176 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 WDR54Q9H977 334 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 KCNIP2Q9NS61 270 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 SLC16A13Q7RTY0 426 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 NUFIP2Q7Z417 695 aaKnown RBP9.63□□□□□ -0.87
HIF3A-205ENST00000377670 CALHM3Q86XJ0 350 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 OR2M7Q8NG81 312 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 EDARADDQ8WWZ3 215 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 DERL3Q96Q80 235 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 SMIM7Q9BQ49 75 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 TXNIPQ9H3M7 391 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 HEXA-AS1Q9H8Q6 139 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 LAMP3Q9UQV4 416 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 TRAPPC4Q9Y296 219 aa9.63□□□□□ -0.87
HIF3A-205ENST00000377670 E5RGE8 158 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 PTBP3O95758 552 aaKnown RBP9.62□□□□□ -0.87
HIF3A-205ENST00000377670 FAM87AP0C7U9 286 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 ENDOGQ14249 297 aaKnown RBP9.62□□□□□ -0.87
HIF3A-205ENST00000377670 MOGAT2Q3SYC2 334 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 SPANXN5Q5MJ07 72 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 UQCC3Q6UW78 93 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 OR4C5Q8NGB2 326 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 PARD6AQ9NPB6 346 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 RNF150Q9ULK6 438 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 NSG2Q9Y328 171 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 AQP8O94778 261 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 POU3F3P20264 500 aaPredicted RBP9.62□□□□□ -0.87
HIF3A-205ENST00000377670 FCER1GP30273 86 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 MMP15P51511 669 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 UBE2G2P60604 165 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 GUCA2AQ02747 115 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 ZNF85Q03923 595 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 FABP9Q0Z7S8 132 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 Q56UQ5 140 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 NCR3LG1Q68D85 454 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 GLDNQ6ZMI3 551 aaPredicted RBP9.62□□□□□ -0.87
HIF3A-205ENST00000377670 ADGRG3Q86Y34 549 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 LSMEM1Q8N8F7 131 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 GPR32P1Q8NGA4 272 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 GRAMD2BQ96HH9 432 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 C2orf50Q96LR7 162 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 SPACA5Q96QH8 159 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 NTMQ9P121 344 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 PTPRFP10586 1907 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 HRKO00198 91 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 CDK2AP1O14519 115 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 ARPC3O15145 178 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 GPR37O15354 613 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 MPGP29372 298 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 OR3A4PP47883 348 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 CDK5R1Q15078 307 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms