RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 DHRS2Q13268 280 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 NDUFA5Q16718 116 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 EIF2S3LQ2VIR3 472 aaKnown RBP10.78□□□□□ -0.68
PRPF4-202ENST00000374199 LGALSLQ3ZCW2 172 aaPredicted RBP10.78□□□□□ -0.68
PRPF4-202ENST00000374199 RFPL4BQ6ZWI9 263 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 LYG2Q86SG7 212 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 NPRL2Q8WTW4 380 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 STARD4Q96DR4 205 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 SLC7A11Q9UPY5 501 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 TRBV6-6A0A0A6YYG2 114 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 SSNA1O43805 119 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 FCER2P06734 321 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 FPR2P25090 351 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 FGF12P61328 243 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 IL24Q13007 206 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 ZDHHC23Q8IYP9 409 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 CHST4Q8NCG5 386 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 OR13G1Q8NGZ3 307 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 TMEM246Q9BRR3 403 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 RTBDNQ9BSG5 229 aaPredicted RBP10.78□□□□□ -0.68
PRPF4-202ENST00000374199 C12orf49Q9H741 205 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 IFT46Q9NQC8 304 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 PCDHB16Q9NRJ7 776 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 ZNF581Q9P0T4 197 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 FAM215AQ9Y5M1 114 aa10.78□□□□□ -0.68
PRPF4-202ENST00000374199 OR5B21A6NL26 309 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 CD300LBA8K4G0 201 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 ZNF850A8MQ14 1090 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 SPRY1O43609 319 aaPredicted RBP10.77□□□□□ -0.68
PRPF4-202ENST00000374199 TOXO94900 526 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 CALCRP30988 508 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 GRK1Q15835 563 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 PLCXD3Q63HM9 321 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 OR10K1Q8NGX5 313 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 CAPSLQ8WWF8 208 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 TRIB1Q96RU8 372 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 TLNRD1Q9H1K6 362 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 C5orf66Q9H5L9 145 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 ZNF71Q9NQZ8 489 aaPredicted RBP10.77□□□□□ -0.68
PRPF4-202ENST00000374199 ZNF69Q9UC07 566 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 BOLA1Q9Y3E2 137 aa10.77□□□□□ -0.68
PRPF4-202ENST00000374199 IGKV1D-8A0A087WSZ0 117 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 IQCF6A8MYZ5 107 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 GLAP06280 429 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 TIMP3P35625 211 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 ECI1P42126 302 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 TDGF1P3P51864 188 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 PLP2Q04941 152 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 HLXQ14774 488 aaPredicted RBP10.77□□□□□ -0.69
PRPF4-202ENST00000374199 GAPTQ8N292 157 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 OR5M8Q8NGP6 311 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 OR51I2Q9H344 312 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 KNTC1P50748 2209 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 C9orf170A2RU37 121 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 CD79AP11912 226 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 APLNRP35414 380 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 ERVK11-1P61568 191 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 CXADRP78310 365 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 RSU1Q15404 277 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 C9orf135Q5VTT2 229 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 MOB3CQ70IA8 216 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 C1orf174Q8IYL3 243 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 ZNF611Q8N823 705 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 OR5L1Q8NGL2 311 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 SULT4A1Q9BR01 284 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 AK3Q9UIJ7 227 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 NOP16Q9Y3C1 178 aaKnown RBP10.77□□□□□ -0.69
PRPF4-202ENST00000374199 AUP1Q9Y679 476 aa10.77□□□□□ -0.69
PRPF4-202ENST00000374199 FAM230AA0A1W2PPH8 454 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 DUS4LO95620 317 aaKnown RBP10.76□□□□□ -0.69
PRPF4-202ENST00000374199 NAPSAO96009 420 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 FCGR3AP08637 254 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 TMEM225BP0DP42 221 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 CCL2P13500 99 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 CEACAM8P31997 349 aaPredicted RBP10.76□□□□□ -0.69
PRPF4-202ENST00000374199 TAS2R31P59538 309 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 SUPT4H1P63272 117 aaKnown RBP10.76□□□□□ -0.69
PRPF4-202ENST00000374199 TGFBR3Q03167 851 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 DCAF12L2Q5VW00 463 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 TMEM211Q6ICI0 200 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 ZNF880Q6PDB4 577 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 C6orf201Q7Z4U5 140 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 BEX1Q9HBH7 125 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 ZNF222Q9UK12 451 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 MGAT4AQ9UM21 535 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 DNAJC13O75165 2243 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 K7EM74 188 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 ANGPTL7O43827 346 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 LILRA1O75019 489 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 WDR1O75083 606 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 PDCD6O75340 191 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 PER3P56645 1201 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 FOXF2Q12947 444 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 P2RY6Q15077 328 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 TBC1D28Q2M2D7 210 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 MPV17LQ2QL34 196 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 DMRTC1Q5HYR2 192 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 VWA1Q6PCB0 445 aa10.76□□□□□ -0.69
PRPF4-202ENST00000374199 WDR89Q96FK6 387 aaPredicted RBP10.76□□□□□ -0.69
PRPF4-202ENST00000374199 MTCH1Q9NZJ7 389 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms