RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 TGFBR3Q03167 851 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 FOXF2Q12947 444 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 EIF2S3LQ2VIR3 472 aaKnown RBP11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 C1orf185Q5T7R7 199 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 TFAP2EQ6VUC0 442 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 TMEM17Q86X19 198 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 CCDC36Q8IYA8 594 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 OR10K1Q8NGX5 313 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 OR1F12Q8NHA8 337 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 FAM57AQ8TBR7 257 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 MITD1Q8WV92 249 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 VRK1Q99986 396 aaPredicted RBP11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 OR2H1Q9GZK4 316 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 ASF1BQ9NVP2 202 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 FBLN5Q9UBX5 448 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 ZNF230Q9UIE0 474 aaPredicted RBP11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 VSIG4Q9Y279 399 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 RHBDD3Q9Y3P4 386 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 FAM215AQ9Y5M1 114 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 A0A096LPE4 126 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 A0A1W2PPZ6 126 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 C9orf170A2RU37 121 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 MBD3L4A6NDZ8 208 aaPredicted RBP11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 MBD3L3A6NE82 208 aaPredicted RBP11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 MBD3L5A6NJ08 208 aaPredicted RBP11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 M0R135 149 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 LMX1BO60663 402 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 CNOT4O95628 575 aaKnown RBP11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 ZNF20P17024 532 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 HTR5AP47898 357 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 TAS2R31P59538 309 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 PSG4Q00888 419 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 ZNF774Q6NX45 483 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 FAM57BQ71RH2 274 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 DPPA2Q7Z7J5 298 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 COMMD2Q86X83 199 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 INO80EQ8NBZ0 244 aaPredicted RBP11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 MBD3L2Q8NHZ7 208 aaPredicted RBP11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 ZNF799Q96GE5 643 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 PGAM5Q96HS1 289 aa11.42□□□□□ -0.58
SQSTM1-201ENST00000360718 PRRG2O14669 202 aa11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 SYNGR3O43761 229 aa11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 CRHP06850 196 aa11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 SLC2A1P11166 492 aa11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 ARR3P36575 388 aa11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 GFRALQ6UXV0 394 aa11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 PAQR4Q8N4S7 273 aaPredicted RBP11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 OR52N4Q8NGI2 321 aa11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 OR10R2Q8NGX6 335 aa11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 AKR7LQ8NHP1 331 aa11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 PPP1R1CQ8WVI7 109 aa11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 NANOS1Q8WY41 292 aaKnown RBP11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 ZNF471Q9BX82 626 aaPredicted RBP11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 GPR160Q9UJ42 338 aa11.41□□□□□ -0.58
SQSTM1-201ENST00000360718 OR6C6A6NF89 314 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 MMP7P09237 267 aaPredicted RBP11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 VSIG8P0DPA2 414 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 OTX1P32242 354 aaPredicted RBP11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 KIR2DL2P43627 348 aaPredicted RBP11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 QRFPP83859 136 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 PPP1R1AQ13522 171 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 VWA1Q6PCB0 445 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 DRAM2Q6UX65 266 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 C17orf107Q6ZR85 190 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 MOB3CQ70IA8 216 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 OR2W3Q7Z3T1 314 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 STPG2Q8N412 459 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 KDF1Q8NAX2 398 aaPredicted RBP11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 RELL2Q8NC24 303 aaPredicted RBP11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 OR8B12Q8NGG6 310 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 OR1K1Q8NGR3 316 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 SEC22AQ96IW7 307 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 DMRTA2Q96SC8 542 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 CST11Q9H112 138 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 TAS2R3Q9NYW6 316 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 ZNF503-AS2A6NEH8 195 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 DUS4LO95620 317 aaKnown RBP11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 CD79AP11912 226 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 ZNF93P35789 620 aaPredicted RBP11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 CYCSP99999 105 aaKnown RBP11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 KLRB1Q12918 225 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 UNC119Q13432 240 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 RSPO1Q2MKA7 263 aaPredicted RBP11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 LRRC37A5PQ49AS3 106 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 PABPC1L2AQ5JQF8 200 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 AWAT2Q6E213 333 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 Q6ZT83 130 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 PGAP1Q75T13 922 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 ANGPTL5Q86XS5 388 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 NAXEQ8NCW5 288 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 OR51E1Q8TCB6 317 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 MRPS24Q96EL2 167 aaKnown RBP11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 ADAT3Q96EY9 351 aaPredicted RBP11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 WNT5BQ9H1J7 359 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 ATPIF1Q9UII2 106 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 PROCRQ9UNN8 238 aa11.4□□□□□ -0.58
SQSTM1-201ENST00000360718 LOC100509620A0A075B734 347 aa11.39□□□□□ -0.59
SQSTM1-201ENST00000360718 FAM25EA8MYX2 175 aa11.39□□□□□ -0.59
SQSTM1-201ENST00000360718 IL18BPO95998 194 aa11.39□□□□□ -0.59
SQSTM1-201ENST00000360718 SFTPCP11686 197 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms