RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 MARCH3Q86UD3 253 aa16.27■□□□□ 0.2
SMPD1-201ENST00000342245 OR1N1Q8NGS0 311 aa16.27■□□□□ 0.2
SMPD1-201ENST00000342245 RNASE8Q8TDE3 154 aaKnown RBP16.27■□□□□ 0.2
SMPD1-201ENST00000342245 RELTQ969Z4 430 aa16.27■□□□□ 0.2
SMPD1-201ENST00000342245 SLC35E2P0CK97 266 aa16.27■□□□□ 0.19
SMPD1-201ENST00000342245 SELENOTP62341 195 aa16.27■□□□□ 0.19
SMPD1-201ENST00000342245 ZNF880Q6PDB4 577 aa16.27■□□□□ 0.19
SMPD1-201ENST00000342245 DEFB128Q7Z7B8 93 aa16.27■□□□□ 0.19
SMPD1-201ENST00000342245 PTPMT1Q8WUK0 201 aaPredicted RBP16.27■□□□□ 0.19
SMPD1-201ENST00000342245 ARHGAP5-AS1Q96IT6 56 aa16.27■□□□□ 0.19
SMPD1-201ENST00000342245 OR5B12Q96R08 314 aa16.27■□□□□ 0.19
SMPD1-201ENST00000342245 RCL1Q9Y2P8 373 aaKnown RBP16.27■□□□□ 0.19
SMPD1-201ENST00000342245 XRCC2O43543 280 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 TNFSF13O75888 250 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 BGLAPP02818 100 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 SELEP16581 610 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 RPL27P61353 136 aaKnown RBP16.26■□□□□ 0.19
SMPD1-201ENST00000342245 P2RY6Q15077 328 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 AGBL4Q5VU57 503 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 OR2C3Q8N628 320 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 TIMM29Q9BSF4 260 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 Q9N2K0 584 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 HSF4Q9ULV5 492 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 CHTOPQ9Y3Y2 248 aaKnown RBP16.26■□□□□ 0.19
SMPD1-201ENST00000342245 HIDE1A8MVS5 230 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 LCATP04180 440 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 UMODP07911 640 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 BCKDHBP21953 392 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 EGR4Q05215 589 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 TMEM187Q14656 261 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.26■□□□□ 0.19
SMPD1-201ENST00000342245 H1FOOQ8IZA3 346 aaPredicted RBP16.26■□□□□ 0.19
SMPD1-201ENST00000342245 OR4N2Q8NGD1 307 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 GPR119Q8TDV5 335 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 FAM122AQ96E09 287 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 NAA60Q9H7X0 242 aa16.26■□□□□ 0.19
SMPD1-201ENST00000342245 C20orf202A1L168 122 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 SERPINE3A8MV23 424 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 DIRAS3O95661 229 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 ZNF823P16415 610 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 HNF1AP20823 631 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 ELLP55199 621 aaPredicted RBP16.25■□□□□ 0.19
SMPD1-201ENST00000342245 KLF3P57682 345 aaPredicted RBP16.25■□□□□ 0.19
SMPD1-201ENST00000342245 ZFP36L1Q07352 338 aaKnown RBP16.25■□□□□ 0.19
SMPD1-201ENST00000342245 ACTL10Q5JWF8 245 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 GRINAQ7Z429 371 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 CMTM1Q8IZ96 169 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 ABHD14AQ9BUJ0 271 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 OR10A2Q9H208 303 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 LAMP3Q9UQV4 416 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 SPTBP11277 2137 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 MTCP1P56278 107 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 ARMC6Q6NXE6 501 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 RTL10Q7L3V2 364 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 RTN4RL2Q86UN3 420 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 FAM89BQ8N5H3 189 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 C11orf42Q8N5U0 333 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 ZNF519Q8TB69 540 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 EXTL1Q92935 676 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 TSLPQ969D9 159 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 C18orf12Q96KH6 178 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 ZNF2Q9BSG1 426 aaPredicted RBP16.25■□□□□ 0.19
SMPD1-201ENST00000342245 TPSD1Q9BZJ3 242 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 PLEKHF2Q9H8W4 249 aa16.25■□□□□ 0.19
SMPD1-201ENST00000342245 FOXS1O43638 330 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 KLF8O95600 359 aaPredicted RBP16.24■□□□□ 0.19
SMPD1-201ENST00000342245 CTHP32929 405 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 LBX1P52954 281 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 SLC37A1P57057 533 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 SQSTM1Q13501 440 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 NKAIN1Q4KMZ8 207 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 ZNF100Q8IYN0 542 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 LGI3Q8N145 548 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 CISD2Q8N5K1 135 aaKnown RBP16.24■□□□□ 0.19
SMPD1-201ENST00000342245 SLC24A4Q8NFF2 622 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 IFI44Q8TCB0 444 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 VSTM2LQ96N03 204 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 HEBP2Q9Y5Z4 205 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 MYOFQ9NZM1 2061 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 CYR61O00622 381 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 PCCBP05166 539 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 H2BFMP0C1H6 154 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 ZNF20P17024 532 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 LIAT1Q6ZQX7 453 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 CENPVQ7Z7K6 275 aaPredicted RBP16.24■□□□□ 0.19
SMPD1-201ENST00000342245 ADAT3Q96EY9 351 aaPredicted RBP16.24■□□□□ 0.19
SMPD1-201ENST00000342245 ABHD14BQ96IU4 210 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 BTF3L4Q96K17 158 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 SLC46A2Q9BY10 475 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 KIR3DX1Q9H7L2 352 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 SCN3AQ9NY46 2000 aa16.24■□□□□ 0.19
SMPD1-201ENST00000342245 NKX6-3A6NJ46 265 aa16.23■□□□□ 0.19
SMPD1-201ENST00000342245 ZNF705FA8MVS1 300 aaPredicted RBP16.23■□□□□ 0.19
SMPD1-201ENST00000342245 ZNF705DP0CH99 300 aaPredicted RBP16.23■□□□□ 0.19
SMPD1-201ENST00000342245 ZNF705BP0CI00 300 aaPredicted RBP16.23■□□□□ 0.19
SMPD1-201ENST00000342245 BCL2P10415 239 aa16.23■□□□□ 0.19
SMPD1-201ENST00000342245 MDKP21741 143 aaPredicted RBP16.23■□□□□ 0.19
SMPD1-201ENST00000342245 RAB7AP51149 207 aa16.23■□□□□ 0.19
SMPD1-201ENST00000342245 METAP1P53582 386 aa16.23■□□□□ 0.19
SMPD1-201ENST00000342245 SCARF2Q96GP6 870 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms