RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 FAM89BQ8N5H3 189 aa12.51□□□□□ -0.41
CBX3-201ENST00000337620 Q96M66 194 aa12.51□□□□□ -0.41
CBX3-201ENST00000337620 TM2D1Q9BX74 207 aa12.51□□□□□ -0.41
CBX3-201ENST00000337620 C11orf54Q9H0W9 315 aaPredicted RBP12.51□□□□□ -0.41
CBX3-201ENST00000337620 PLSCR5A0PG75 271 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 LRP5LA4QPB2 252 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 TMEM50BP56557 158 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 TFF3Q07654 80 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 TAF9Q16594 264 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 PIGYQ3MUY2 71 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 FAM76BQ5HYJ3 339 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 PLAC9Q5JTB6 97 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 HACD4Q5VWC8 232 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 GDPD3Q7L5L3 318 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 TMEM200AQ86VY9 491 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 SCCPDHQ8NBX0 429 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 OR2Z1Q8NG97 314 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 AQP3Q92482 292 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 GTF3AQ92664 365 aaKnown RBP12.5□□□□□ -0.41
CBX3-201ENST00000337620 ARHGAP5-AS1Q96IT6 56 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 ZNF488Q96MN9 340 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 NUDT16L1Q9BRJ7 211 aaKnown RBP12.5□□□□□ -0.41
CBX3-201ENST00000337620 CXXC4Q9H2H0 198 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 RBFOX1Q9NWB1 397 aaKnown RBP12.5□□□□□ -0.41
CBX3-201ENST00000337620 TAAR3PQ9P1P4 343 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 ST3GAL6Q9Y274 331 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 IGLV3-9A0A075B6K5 115 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 F8VVB4 439 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 F8VWA3 439 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 CDIPTO14735 213 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 SSX4O60224 188 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 RHBDL1O75783 438 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 RBBP9O75884 186 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 CLDN14O95500 239 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 PTTG1O95997 202 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 FCER2P06734 321 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 SNU13P55769 128 aaKnown RBP12.5□□□□□ -0.41
CBX3-201ENST00000337620 IL24Q13007 206 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 ZNF154Q13106 437 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 SPERTQ8NA61 448 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 ITLN2Q8WWU7 325 aaPredicted RBP12.5□□□□□ -0.41
CBX3-201ENST00000337620 MRPL24Q96A35 216 aaKnown RBP12.5□□□□□ -0.41
CBX3-201ENST00000337620 SEH1LQ96EE3 360 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 MRPS24Q96EL2 167 aaKnown RBP12.5□□□□□ -0.41
CBX3-201ENST00000337620 COX4I2Q96KJ9 171 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 PKIBQ9C010 78 aa12.5□□□□□ -0.41
CBX3-201ENST00000337620 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.49□□□□□ -0.41
CBX3-201ENST00000337620 TMEM210A6NLX4 147 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 J3QT63 122 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 GEMIN2O14893 280 aaKnown RBP12.49□□□□□ -0.41
CBX3-201ENST00000337620 LYRM1O43325 122 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 HIST1H1DP16402 221 aaKnown RBP12.49□□□□□ -0.41
CBX3-201ENST00000337620 MAB21L1Q13394 359 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 PDCD1Q15116 288 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 NRARPQ7Z6K4 114 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 RBMX2Q9Y388 322 aaKnown RBP12.49□□□□□ -0.41
CBX3-201ENST00000337620 H7C417 338 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 CD3EP07766 207 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 SPNP16150 400 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 MPZP25189 248 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 NKPD1Q17RQ9 610 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 NKAPLQ5M9Q1 402 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 OLFML2AQ68BL7 652 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 DNM1P46Q6ZS02 220 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 MINDY2Q8NBR6 621 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 GPX8Q8TED1 209 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 CYYR1Q96J86 154 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 HS3ST6Q96QI5 342 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 MTFP1Q9UDX5 166 aa12.49□□□□□ -0.41
CBX3-201ENST00000337620 PLCE1Q9P212 2302 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 hCG_2014768A0A024R1R8 64 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 ZSCAN5BA6NJL1 495 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 SHISA9B4DS77 424 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 SULT1C2O00338 296 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 LPLP06858 475 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 OR4A8P0C604 315 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 GSTT2BP0CG30 244 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 RFX2P48378 723 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 RBM11P57052 281 aaKnown RBP12.48□□□□□ -0.41
CBX3-201ENST00000337620 PRAMEF6Q5VXH4 476 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 MZT2BQ6NZ67 158 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 Q6ZNX1 250 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 ZNF808Q8N4W9 903 aaPredicted RBP12.48□□□□□ -0.41
CBX3-201ENST00000337620 NUDCD2Q8WVJ2 157 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 ELMOD3Q96FG2 381 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 PECRQ9BY49 303 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 PLK3Q9H4B4 646 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 ZNF442Q9H7R0 627 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 SCPEP1Q9HB40 452 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 PLEKHJ1Q9NW61 149 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 ZNF581Q9P0T4 197 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 POLDIP2Q9Y2S7 368 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 KCNK7Q9Y2U2 307 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 CACNG2Q9Y698 323 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 ICE1Q9Y2F5 2266 aa12.48□□□□□ -0.41
CBX3-201ENST00000337620 A6NLC8 198 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 CENPXA8MT69 81 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 FOXI3A8MTJ6 420 aaPredicted RBP12.47□□□□□ -0.41
CBX3-201ENST00000337620 VSTM5A8MXK1 200 aa12.47□□□□□ -0.41
CBX3-201ENST00000337620 C3orf80F5H4A9 247 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms