RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 MFNGO00587 321 aa11.76□□□□□ -0.53
SNED1-201ENST00000310397 OR5AC1P0C628 307 aa11.76□□□□□ -0.53
SNED1-201ENST00000310397 RFC3P40938 356 aa11.76□□□□□ -0.53
SNED1-201ENST00000310397 GNG3P63215 75 aa11.76□□□□□ -0.53
SNED1-201ENST00000310397 SEZ6L2Q6UXD5 910 aa11.76□□□□□ -0.53
SNED1-201ENST00000310397 ZNRF4Q8WWF5 429 aa11.76□□□□□ -0.53
SNED1-201ENST00000310397 FAM173AQ9BQD7 235 aa11.76□□□□□ -0.53
SNED1-201ENST00000310397 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.76□□□□□ -0.53
SNED1-201ENST00000310397 SPTBN2O15020 2390 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 AQP7P3A6NL99 342 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 GLULP15104 373 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 LBHQ53QV2 105 aaPredicted RBP11.75□□□□□ -0.53
SNED1-201ENST00000310397 LINC01555Q8NAE3 123 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 C10orf35Q96D05 121 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 PPP1R3EQ9H7J1 279 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 MANBALQ9NQG1 85 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 LSM2Q9Y333 95 aaKnown RBP11.75□□□□□ -0.53
SNED1-201ENST00000310397 INTS1Q8N201 2190 aaKnown RBP11.75□□□□□ -0.53
SNED1-201ENST00000310397 NDUFB7P17568 137 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 GPM6AP51674 278 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 SMUG1Q53HV7 270 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 FAM209AQ5JX71 171 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 TOMM20LQ6UXN7 152 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 MS4A10Q96PG2 267 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 ZNF230Q9UIE0 474 aaPredicted RBP11.75□□□□□ -0.53
SNED1-201ENST00000310397 CNN1P51911 297 aaKnown RBP11.75□□□□□ -0.53
SNED1-201ENST00000310397 IFITM3Q01628 133 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 ADAM20O43506 726 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 WISP3O95389 354 aaPredicted RBP11.75□□□□□ -0.53
SNED1-201ENST00000310397 ZNF250P15622 560 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 G0S2P27469 103 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 FAM74A3Q4VXF1 159 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 OCIAD1Q9NX40 245 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 HEATR5AQ86XA9 2040 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 ZNF646O15015 1829 aaPredicted RBP11.75□□□□□ -0.53
SNED1-201ENST00000310397 DOCK8Q8NF50 2099 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 HOXC4P09017 264 aaPredicted RBP11.75□□□□□ -0.53
SNED1-201ENST00000310397 CDAP32320 146 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 ATP6V1FQ16864 119 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 OR2B11Q5JQS5 317 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 NPEPL1Q8NDH3 523 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 ANAPC16Q96DE5 110 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 POM121L2Q96KW2 1035 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 C3orf85A0A1B0GTC6 90 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 M0QZK8 103 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 GGCTO75223 188 aaKnown RBP11.75□□□□□ -0.53
SNED1-201ENST00000310397 ZNF737O75373 536 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 OR5G3P0C626 314 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 B4GALT1P15291 398 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 PPP2CBP62714 309 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 PPP2CAP67775 309 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 FOXF1Q12946 379 aa11.75□□□□□ -0.53
SNED1-201ENST00000310397 MDH2P40926 338 aaKnown RBP11.74□□□□□ -0.53
SNED1-201ENST00000310397 ZNF770Q6IQ21 691 aaPredicted RBP11.74□□□□□ -0.53
SNED1-201ENST00000310397 KLF13Q9Y2Y9 288 aaPredicted RBP11.74□□□□□ -0.53
SNED1-201ENST00000310397 AWAT1Q58HT5 328 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 PLAC9Q5JTB6 97 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 TMEM65Q6PI78 240 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 TCTEX1D1Q8N7M0 179 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 THOC3Q96J01 351 aaKnown RBP11.74□□□□□ -0.53
SNED1-201ENST00000310397 ALX4Q9H161 411 aaPredicted RBP11.74□□□□□ -0.53
SNED1-201ENST00000310397 FRRS1LQ9P0K9 344 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 MRM2Q9UI43 246 aaKnown RBP11.74□□□□□ -0.53
SNED1-201ENST00000310397 NYNRINQ9P2P1 1898 aaKnown RBP11.74□□□□□ -0.53
SNED1-201ENST00000310397 PMP22Q01453 160 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 IL24Q13007 206 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 USB1Q9BQ65 265 aaKnown RBP11.74□□□□□ -0.53
SNED1-201ENST00000310397 MYO7BQ6PIF6 2116 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 WNK2Q9Y3S1 2297 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 DUXBA0A1W2PPF3 345 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 TMEM30CPA0ZSE6 113 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 PPIAP62937 165 aaKnown RBP11.74□□□□□ -0.53
SNED1-201ENST00000310397 CLEC12BQ2HXU8 276 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 ZNF707Q96C28 371 aaPredicted RBP11.74□□□□□ -0.53
SNED1-201ENST00000310397 P2RY1P47900 373 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 WDR73Q6P4I2 378 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 SCN5AQ14524 2016 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 DBX1A6NMT0 343 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 PLPP3O14495 311 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 PDCD6O75340 191 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 COX14Q96I36 57 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 TSPAN32Q96QS1 320 aa11.74□□□□□ -0.53
SNED1-201ENST00000310397 MAP1LC3B2A6NCE7 125 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 CBY3A6NI87 242 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 SPRY1O43609 319 aaPredicted RBP11.73□□□□□ -0.53
SNED1-201ENST00000310397 GZMMP51124 257 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 ZNF718Q3SXZ3 478 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 AMER3Q8N944 861 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 MAP1LC3BQ9GZQ8 125 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 TAAR3PQ9P1P4 343 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 SCN10AQ9Y5Y9 1956 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 A0A1W2PPC4 97 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 M0R143 59 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 SOX15O60248 233 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 CCR2P41597 374 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 NAAAQ02083 359 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 OTPQ5XKR4 325 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 PET117Q6UWS5 81 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 GPR37O15354 613 aa11.73□□□□□ -0.53
SNED1-201ENST00000310397 GATCO43716 136 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms