RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 IGLV3-9A0A075B6K5 115 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 A0A1B0GWJ7 208 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 PLSCR5A0PG75 271 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 TMEM235A6NFC5 223 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 VSTM5A8MXK1 200 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 J3QT63 122 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 HIST1H1DP16402 221 aaKnown RBP14.93□□□□□ -0.02
KRT28-201ENST00000306658 GNB3P16520 340 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 GABRR1P24046 479 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 UQCRFS1P47985 274 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 TMEM50BP56557 158 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 ACTBP60709 375 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 ACTG1P63261 375 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 NRARPQ7Z6K4 114 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 FBXL14Q8N1E6 418 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 RHOFQ9HBH0 211 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 MSL2Q9HCI7 577 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 CA10Q9NS85 328 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 RBFOX1Q9NWB1 397 aaKnown RBP14.93□□□□□ -0.02
KRT28-201ENST00000306658 MTCH1Q9NZJ7 389 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 ST3GAL6Q9Y274 331 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 POLDIP2Q9Y2S7 368 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 CACNG2Q9Y698 323 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 PLCE1Q9P212 2302 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 WIPF3A6NGB9 483 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 PRSS44E7EML9 344 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 H0YL77 283 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 MLNRO43193 412 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 BCL3P20749 454 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 AGAP20933 346 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 NPBWR2P48146 333 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 RFX2P48378 723 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 GUCA2AQ02747 115 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 KLF9Q13886 244 aaPredicted RBP14.93□□□□□ -0.02
KRT28-201ENST00000306658 CDSNQ15517 529 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 PNLIPRP3Q17RR3 467 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 MSMPQ1L6U9 139 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 PLAC9Q5JTB6 97 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 NCMAPQ5T1S8 102 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 Q6ZR03 302 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 LRP11Q86VZ4 500 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 OR10AD1Q8NGE0 317 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 ENKURQ8TC29 256 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 DEDD2Q8WXF8 326 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 ARHGAP5-AS1Q96IT6 56 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 ZNF442Q9H7R0 627 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 POU2F3Q9UKI9 436 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 ATP23Q9Y6H3 246 aa14.93□□□□□ -0.02
KRT28-201ENST00000306658 ANKRD20A5PA0PJZ0 165 aa14.92□□□□□ -0.02
KRT28-201ENST00000306658 TUBAL3A6NHL2 446 aa14.92□□□□□ -0.02
KRT28-201ENST00000306658 FOXI3A8MTJ6 420 aaPredicted RBP14.92□□□□□ -0.02
KRT28-201ENST00000306658 SYNGR1O43759 233 aa14.92□□□□□ -0.02
KRT28-201ENST00000306658 CSF1P09603 554 aa14.92□□□□□ -0.02
KRT28-201ENST00000306658 ZNF154Q13106 437 aa14.92□□□□□ -0.02
KRT28-201ENST00000306658 TAF9Q16594 264 aa14.92□□□□□ -0.02
KRT28-201ENST00000306658 CCBE1Q6UXH8 406 aaPredicted RBP14.92□□□□□ -0.02
KRT28-201ENST00000306658 WDR86Q86TI4 376 aa14.92□□□□□ -0.02
KRT28-201ENST00000306658 ZNF808Q8N4W9 903 aaPredicted RBP14.92□□□□□ -0.02
KRT28-201ENST00000306658 SCCPDHQ8NBX0 429 aa14.92□□□□□ -0.02
KRT28-201ENST00000306658 LINC01560Q8TB33 94 aa14.92□□□□□ -0.02
KRT28-201ENST00000306658 MRPL24Q96A35 216 aaKnown RBP14.92□□□□□ -0.02
KRT28-201ENST00000306658 SYT3Q9BQG1 590 aa14.92□□□□□ -0.02
KRT28-201ENST00000306658 PLK3Q9H4B4 646 aa14.92□□□□□ -0.02
KRT28-201ENST00000306658 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.92□□□□□ -0.02
KRT28-201ENST00000306658 PLEKHJ1Q9NW61 149 aa14.92□□□□□ -0.02
KRT28-201ENST00000306658 SERPINE3A8MV23 424 aa14.91□□□□□ -0.02
KRT28-201ENST00000306658 GRPP07492 148 aa14.91□□□□□ -0.02
KRT28-201ENST00000306658 GRNP28799 593 aaKnown RBP14.91□□□□□ -0.02
KRT28-201ENST00000306658 RBM11P57052 281 aaKnown RBP14.91□□□□□ -0.02
KRT28-201ENST00000306658 GNG2P59768 71 aa14.91□□□□□ -0.02
KRT28-201ENST00000306658 FGF12P61328 243 aa14.91□□□□□ -0.02
KRT28-201ENST00000306658 PCGF3Q3KNV8 242 aa14.91□□□□□ -0.02
KRT28-201ENST00000306658 Q8IYB0 196 aa14.91□□□□□ -0.02
KRT28-201ENST00000306658 PLPPR2Q96GM1 343 aa14.91□□□□□ -0.02
KRT28-201ENST00000306658 NEDD4LQ96PU5 975 aa14.91□□□□□ -0.02
KRT28-201ENST00000306658 MRPL37Q9BZE1 423 aaKnown RBP14.91□□□□□ -0.02
KRT28-201ENST00000306658 TAAR3PQ9P1P4 343 aa14.91□□□□□ -0.02
KRT28-201ENST00000306658 ELF5Q9UKW6 265 aaPredicted RBP14.91□□□□□ -0.02
KRT28-201ENST00000306658 FAM240BA0A1B0GVZ2 78 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A10PA6NDY2 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A18PA6NE21 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A16PA6NEW6 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A20PA6NIJ5 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A8PA6NJQ4 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A7PA6NKC0 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A22PA8MWA6 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A12PA8MX19 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A5PA8MXJ8 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A23PA8MXZ1 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 F5H5P2 479 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 MFNGO00587 321 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 GEMIN2O14893 280 aaKnown RBP14.9□□□□□ -0.02
KRT28-201ENST00000306658 CLDN14O95500 239 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A15PP0C7V4 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A13PP0C7W8 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A14PP0C7W9 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 FAM90A24PP0C7X0 464 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 SNTB1Q13884 538 aaKnown RBP14.9□□□□□ -0.02
KRT28-201ENST00000306658 PIGYQ3MUY2 71 aa14.9□□□□□ -0.02
KRT28-201ENST00000306658 NHLRC3Q5JS37 347 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms