RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 SPSB4Q96A44 273 aa12.11□□□□□ -0.47
NXF1-201ENST00000294172 MARVELD3Q96A59 401 aa12.11□□□□□ -0.47
NXF1-201ENST00000294172 NARFLQ9H6Q4 476 aa12.11□□□□□ -0.47
NXF1-201ENST00000294172 PRR13Q9NZ81 148 aa12.11□□□□□ -0.47
NXF1-201ENST00000294172 AK3Q9UIJ7 227 aa12.11□□□□□ -0.47
NXF1-201ENST00000294172 C5orf51A6NDU8 294 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 TPD52L2O43399 206 aaKnown RBP12.1□□□□□ -0.47
NXF1-201ENST00000294172 CD8AP01732 235 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 GLRA1P23415 457 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 NHLRC3Q5JS37 347 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 RTL6Q6ICC9 239 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 OVCH2Q7RTZ1 564 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 CALHM1Q8IU99 346 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 OSR2Q8N2R0 312 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 DYRK2Q92630 601 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 TMEM230Q96A57 120 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 WDYHV1Q96HA8 205 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 CCDC120Q96HB5 630 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 RNF122Q9H9V4 155 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 RDH8Q9NYR8 311 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 ATPIF1Q9UII2 106 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 RIF1Q5UIP0 2472 aaKnown RBP12.1□□□□□ -0.47
NXF1-201ENST00000294172 SLC22A20A6NK97 555 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 CDRT15L2A8MXV6 281 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 SCO1O75880 301 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 RPA2P15927 270 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 FPR2P25090 351 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 CD82P27701 267 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 OPRM1P35372 400 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 PPA1Q15181 289 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 HIKESHIQ53FT3 197 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 ALKAL2Q6UX46 152 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 GSG1LQ6UXU4 331 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 ASCL4Q6XD76 172 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 MRPL21Q7Z2W9 205 aaKnown RBP12.1□□□□□ -0.47
NXF1-201ENST00000294172 ZSCAN4Q8NAM6 433 aaPredicted RBP12.1□□□□□ -0.47
NXF1-201ENST00000294172 SCGB3A2Q96PL1 93 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 CMSS1Q9BQ75 279 aaKnown RBP12.1□□□□□ -0.47
NXF1-201ENST00000294172 RTBDNQ9BSG5 229 aaPredicted RBP12.1□□□□□ -0.47
NXF1-201ENST00000294172 ST3GAL6Q9Y274 331 aa12.1□□□□□ -0.47
NXF1-201ENST00000294172 FAM221AA4D161 298 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 CA11O75493 328 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 NGFP01138 241 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 TNFSF10P50591 281 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 MALLQ13021 153 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 CLEC18BQ6UXF7 455 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 SLC25A26Q70HW3 274 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 LHFPL1Q86WI0 220 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 ZNF611Q8N823 705 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 TMEM185AQ8NFB2 350 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 OR10AD1Q8NGE0 317 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 SULT4A1Q9BR01 284 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 REPIN1Q9BWE0 567 aaKnown RBP12.09□□□□□ -0.47
NXF1-201ENST00000294172 OSGIN2Q9Y236 505 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 ZNF318Q5VUA4 2279 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 MSTNO14793 375 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 KNG1P01042 644 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 PGAM2P15259 253 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 HLA-GP17693 338 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 AGTR1P30556 359 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 ARR3P36575 388 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 SERPINF1P36955 418 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 PLP2Q04941 152 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 STK11Q15831 433 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 C11orf87Q6NUJ2 197 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 FDCSPQ8NFU4 85 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 COQ8AQ8NI60 647 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 APOBEC3DQ96AK3 386 aaPredicted RBP12.09□□□□□ -0.47
NXF1-201ENST00000294172 TECTBQ96PL2 329 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 ZNF2Q9BSG1 426 aaPredicted RBP12.09□□□□□ -0.47
NXF1-201ENST00000294172 OR51B6Q9H340 312 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 CRIM1Q9NZV1 1036 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 ZNF629Q9UEG4 869 aaPredicted RBP12.09□□□□□ -0.47
NXF1-201ENST00000294172 KIF25Q9UIL4 384 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 STARD10Q9Y365 291 aa12.09□□□□□ -0.47
NXF1-201ENST00000294172 CEACAM18A8MTB9 384 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 SPDEFO95238 335 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 SFT2D2O95562 160 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 CHATP28329 748 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 SRSF4Q08170 494 aaKnown RBP12.08□□□□□ -0.48
NXF1-201ENST00000294172 PRDX4Q13162 271 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 BEX5Q5H9J7 111 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 PEG10Q86TG7 708 aaKnown RBP12.08□□□□□ -0.48
NXF1-201ENST00000294172 BHLHE23Q8NDY6 225 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 PXT1Q8NFP0 134 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 ASCL3Q9NQ33 180 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 ANXA10Q9UJ72 324 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 HSF4Q9ULV5 492 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 ZFHX2Q9C0A1 2572 aaPredicted RBP12.08□□□□□ -0.48
NXF1-201ENST00000294172 TUBAL3A6NHL2 446 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 POM121CA8CG34 1229 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 ZNF205O95201 554 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 NPBWR2P48146 333 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 GPM6AP51674 278 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 RBPMSQ93062 196 aaKnown RBP12.08□□□□□ -0.48
NXF1-201ENST00000294172 POM121L2Q96KW2 1035 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 ZDHHC11Q9H8X9 412 aa12.08□□□□□ -0.48
NXF1-201ENST00000294172 DBX1A6NMT0 343 aa12.07□□□□□ -0.48
NXF1-201ENST00000294172 ADAP1O75689 374 aa12.07□□□□□ -0.48
NXF1-201ENST00000294172 OR7C1O76099 320 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms