RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 LHX6Q9UPM6 363 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 ST3GAL6Q9Y274 331 aa14.29□□□□□ -0.12
CCDC40-201ENST00000269318 LILRA1O75019 489 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 TNFSF13O75888 250 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 HOXB1P14653 301 aaPredicted RBP14.28□□□□□ -0.12
CCDC40-201ENST00000269318 ZBTB25P24278 435 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 NPBWR2P48146 333 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 GPM6AP51674 278 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 RBM11P57052 281 aaKnown RBP14.28□□□□□ -0.12
CCDC40-201ENST00000269318 TAS2R46P59540 309 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 TSC22D1Q15714 1073 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 INO80CQ6PI98 192 aaPredicted RBP14.28□□□□□ -0.12
CCDC40-201ENST00000269318 LHFPL1Q86WI0 220 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 SAXO1Q8IYX7 474 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 C1orf162Q8NEQ5 155 aaPredicted RBP14.28□□□□□ -0.12
CCDC40-201ENST00000269318 OR10AD1Q8NGE0 317 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 OR5A2Q8NGI9 324 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 MAFIPQ8WZ33 124 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 SULT4A1Q9BR01 284 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 HDHD3Q9BSH5 251 aaPredicted RBP14.28□□□□□ -0.12
CCDC40-201ENST00000269318 OR51B6Q9H340 312 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 AK3Q9UIJ7 227 aa14.28□□□□□ -0.12
CCDC40-201ENST00000269318 IGKV1D-8A0A087WSZ0 117 aa14.27□□□□□ -0.12
CCDC40-201ENST00000269318 MBD3L4A6NDZ8 208 aaPredicted RBP14.27□□□□□ -0.12
CCDC40-201ENST00000269318 MBD3L3A6NE82 208 aaPredicted RBP14.27□□□□□ -0.12
CCDC40-201ENST00000269318 MBD3L5A6NJ08 208 aaPredicted RBP14.27□□□□□ -0.12
CCDC40-201ENST00000269318 IL2RAP01589 272 aa14.27□□□□□ -0.12
CCDC40-201ENST00000269318 IDH3GP51553 393 aaPredicted RBP14.27□□□□□ -0.12
CCDC40-201ENST00000269318 FOXC1Q12948 553 aa14.27□□□□□ -0.12
CCDC40-201ENST00000269318 MPPED2Q15777 294 aa14.27□□□□□ -0.12
CCDC40-201ENST00000269318 FAHD2BQ6P2I3 314 aaPredicted RBP14.27□□□□□ -0.12
CCDC40-201ENST00000269318 TMEM200AQ86VY9 491 aa14.27□□□□□ -0.12
CCDC40-201ENST00000269318 C12orf45Q8N5I9 185 aaPredicted RBP14.27□□□□□ -0.12
CCDC40-201ENST00000269318 OR5AP2Q8NGF4 316 aa14.27□□□□□ -0.12
CCDC40-201ENST00000269318 MBD3L2Q8NHZ7 208 aaPredicted RBP14.27□□□□□ -0.12
CCDC40-201ENST00000269318 OR5P3Q8WZ94 311 aa14.27□□□□□ -0.12
CCDC40-201ENST00000269318 FAHD2AQ96GK7 314 aa14.27□□□□□ -0.12
CCDC40-201ENST00000269318 POM121Q96HA1 1249 aa14.27□□□□□ -0.12
CCDC40-201ENST00000269318 ZNF732B4DXR9 585 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 GOSR2O14653 212 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 SMPD2O60906 423 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 TOXO94900 526 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 SIX6O95475 246 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 CGAP01215 116 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 HAAOP46952 286 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 PLEKHN1Q494U1 663 aaPredicted RBP14.27□□□□□ -0.13
CCDC40-201ENST00000269318 DCAF12L2Q5VW00 463 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 ELP2Q6IA86 826 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 FBXW12Q6X9E4 464 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 OVCH2Q7RTZ1 564 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 WDR31Q8NA23 367 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 UXS1Q8NBZ7 420 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 BHLHE23Q8NDY6 225 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 MARCH1Q8TCQ1 289 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 GPR137Q96N19 417 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 OPN4Q9UHM6 478 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 MPC1Q9Y5U8 109 aa14.27□□□□□ -0.13
CCDC40-201ENST00000269318 ANKRD30BLA7E2S9 258 aa14.26□□□□□ -0.13
CCDC40-201ENST00000269318 HLA-AP01891 365 aaKnown RBP14.26□□□□□ -0.13
CCDC40-201ENST00000269318 PPP1R1AQ13522 171 aa14.26□□□□□ -0.13
CCDC40-201ENST00000269318 LYG2Q86SG7 212 aa14.26□□□□□ -0.13
CCDC40-201ENST00000269318 ADAD2Q8NCV1 583 aaKnown RBP14.26□□□□□ -0.13
CCDC40-201ENST00000269318 OR13G1Q8NGZ3 307 aa14.26□□□□□ -0.13
CCDC40-201ENST00000269318 STARD4Q96DR4 205 aa14.26□□□□□ -0.13
CCDC40-201ENST00000269318 ZNF701Q9NV72 531 aaPredicted RBP14.26□□□□□ -0.13
CCDC40-201ENST00000269318 GPR132Q9UNW8 380 aa14.26□□□□□ -0.13
CCDC40-201ENST00000269318 OSGIN2Q9Y236 505 aa14.26□□□□□ -0.13
CCDC40-201ENST00000269318 PDCD6O75340 191 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 IGKV3-15P01624 115 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 CBR1P16152 277 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 BCL3P20749 454 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 DTYMKP23919 212 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 OR3A3P47888 321 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 DHODHQ02127 395 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 MRPL49Q13405 166 aaKnown RBP14.25□□□□□ -0.13
CCDC40-201ENST00000269318 LGALSLQ3ZCW2 172 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-201ENST00000269318 SPATA46Q5T0L3 261 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 AADACL3Q5VUY0 350 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 OR2T2Q6IF00 324 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 PEG10Q86TG7 708 aaKnown RBP14.25□□□□□ -0.13
CCDC40-201ENST00000269318 EDARQ9UNE0 448 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 C9orf170A2RU37 121 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 SDCBPO00560 298 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-201ENST00000269318 RRP8O43159 456 aaKnown RBP14.25□□□□□ -0.13
CCDC40-201ENST00000269318 SLC22A5O76082 557 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 GSTT2P0CG29 244 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 ZNF35P13682 527 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 IL32P24001 234 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 TSPAN5P62079 268 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 CHRFAM7AQ494W8 412 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 LY6G6FQ5SQ64 297 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 ZNF610Q8N9Z0 462 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 ASB13Q8WXK3 278 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 SLAMF9Q96A28 289 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 HIST1H2AAQ96QV6 131 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 CMSS1Q9BQ75 279 aaKnown RBP14.25□□□□□ -0.13
CCDC40-201ENST00000269318 SCNM1Q9BWG6 230 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 PPA2Q9H2U2 334 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 C5orf66Q9H5L9 145 aa14.25□□□□□ -0.13
CCDC40-201ENST00000269318 CDH20Q9HBT6 801 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms