RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 IGHV1OR15-9A0A0B4J2B8 117 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 OR8U8P0C7N1 319 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 DANCRP0C864 163 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 ZNF728P0DKX0 622 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 MTCP1P56278 107 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 HMGN3Q15651 99 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 PLXDC1Q8IUK5 500 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 D2HGDHQ8N465 521 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 OR11L1Q8NGX0 322 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 RTN4IP1Q8WWV3 396 aaPredicted RBP15.25■□□□□ 0.03
TRAM1-201ENST00000262213 MRGPRX4Q96LA9 322 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 AK3Q9UIJ7 227 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 EML6Q6ZMW3 1958 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 E5RGE8 158 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 LMO7DNF2Z398 122 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 SUMO3P55854 103 aaPredicted RBP15.25■□□□□ 0.03
TRAM1-201ENST00000262213 RNF212Q495C1 297 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 ACER2Q5QJU3 275 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 PHYHD1Q5SRE7 291 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 PLPP5Q8NEB5 264 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 OR6X1Q8NH79 312 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 ZNF501Q96CX3 271 aaPredicted RBP15.25■□□□□ 0.03
TRAM1-201ENST00000262213 RARRES2Q99969 163 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 WDR77Q9BQA1 342 aaPredicted RBP15.25■□□□□ 0.03
TRAM1-201ENST00000262213 RBM24Q9BX46 236 aaKnown RBP15.25■□□□□ 0.03
TRAM1-201ENST00000262213 PLEKHA2Q9HB19 425 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 KCNIP3Q9Y2W7 256 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 NSG2Q9Y328 171 aa15.25■□□□□ 0.03
TRAM1-201ENST00000262213 CCDC85CA6NKD9 419 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 SLC33A1O00400 549 aaPredicted RBP15.24■□□□□ 0.03
TRAM1-201ENST00000262213 GPR37O15354 613 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 DUX1O43812 170 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 PNLIPP16233 465 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 MEX3BQ6ZN04 569 aaKnown RBP15.24■□□□□ 0.03
TRAM1-201ENST00000262213 LYPD6BQ8NI32 183 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 SLAMF9Q96A28 289 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 OXGR1Q96P68 337 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 A0A1W2PR77 199 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 DHRS3O75911 302 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 SLC35A1P78382 337 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 CLINT1Q14677 625 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 FBXW12Q6X9E4 464 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 C17orf82Q86X59 251 aaPredicted RBP15.24■□□□□ 0.03
TRAM1-201ENST00000262213 NFAM1Q8NET5 270 aaPredicted RBP15.24■□□□□ 0.03
TRAM1-201ENST00000262213 MARS2Q96GW9 593 aaKnown RBP15.24■□□□□ 0.03
TRAM1-201ENST00000262213 SCRT1Q9BWW7 348 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 CHRNA10Q9GZZ6 450 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 EIF1BO60739 113 aaKnown RBP15.24■□□□□ 0.03
TRAM1-201ENST00000262213 IGLV3-19P01714 112 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 EIF1P41567 113 aaKnown RBP15.24■□□□□ 0.03
TRAM1-201ENST00000262213 ZNF84P51523 738 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 RSU1Q15404 277 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 CPEB2Q7Z5Q1 589 aaKnown RBP15.24■□□□□ 0.03
TRAM1-201ENST00000262213 SUMF1Q8NBK3 374 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 HAS2Q92819 552 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 GNRHR2Q96P88 292 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 BCL2L14Q9BZR8 327 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 ZDHHC8Q9ULC8 765 aa15.24■□□□□ 0.03
TRAM1-201ENST00000262213 OMGP23515 440 aa15.23■□□□□ 0.03
TRAM1-201ENST00000262213 PAX6P26367 422 aa15.23■□□□□ 0.03
TRAM1-201ENST00000262213 HNRNPKP61978 463 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRAM1-201ENST00000262213 JSRP1Q96MG2 331 aaPredicted RBP15.23■□□□□ 0.03
TRAM1-201ENST00000262213 NAA60Q9H7X0 242 aa15.23■□□□□ 0.03
TRAM1-201ENST00000262213 SEBOXQ9HB31 216 aaPredicted RBP15.23■□□□□ 0.03
TRAM1-201ENST00000262213 METTL1Q9UBP6 276 aaKnown RBP15.23■□□□□ 0.03
TRAM1-201ENST00000262213 TIAF1O95411 115 aa15.23■□□□□ 0.03
TRAM1-201ENST00000262213 CD27P26842 260 aa15.23■□□□□ 0.03
TRAM1-201ENST00000262213 TMEM187Q14656 261 aa15.23■□□□□ 0.03
TRAM1-201ENST00000262213 SNAI3Q3KNW1 292 aa15.23■□□□□ 0.03
TRAM1-201ENST00000262213 SLC22A8Q8TCC7 542 aa15.23■□□□□ 0.03
TRAM1-201ENST00000262213 TCTEX1D2Q8WW35 142 aa15.23■□□□□ 0.03
TRAM1-201ENST00000262213 TM2D1Q9BX74 207 aa15.23■□□□□ 0.03
TRAM1-201ENST00000262213 PLEK2Q9NYT0 353 aa15.23■□□□□ 0.03
TRAM1-201ENST00000262213 PISDQ9UG56 409 aa15.23■□□□□ 0.03
TRAM1-201ENST00000262213 MMP24Q9Y5R2 645 aa15.23■□□□□ 0.03
TRAM1-201ENST00000262213 CCDC163A0A0D9SF12 145 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 GPR137BO60478 399 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 SEC11BP0C7V7 166 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 PTGDSP41222 190 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 P2RY1P47900 373 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 CSNK1A1P48729 337 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 SLC22A25Q6T423 547 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 SGK3Q96BR1 496 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 ABHD14AQ9BUJ0 271 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 CHST5Q9GZS9 411 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 ZNF727A8MUV8 499 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 CDRT15L2A8MXV6 281 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 C2CD4DB7Z1M9 353 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 PHF1O43189 567 aaPredicted RBP15.22■□□□□ 0.03
TRAM1-201ENST00000262213 TLX3O43711 291 aaPredicted RBP15.22■□□□□ 0.03
TRAM1-201ENST00000262213 YIF1AO95070 293 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 MSR1P21757 451 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 RPS10P46783 165 aaKnown RBP15.22■□□□□ 0.03
TRAM1-201ENST00000262213 Q96M66 194 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 SLC35B3Q9H1N7 401 aa15.22■□□□□ 0.03
TRAM1-201ENST00000262213 OR2C1O95371 312 aa15.21■□□□□ 0.03
TRAM1-201ENST00000262213 CCL20P78556 96 aa15.21■□□□□ 0.03
TRAM1-201ENST00000262213 LINC00469Q8N7U9 141 aa15.21■□□□□ 0.03
TRAM1-201ENST00000262213 ZNF385AQ96PM9 386 aaKnown RBP15.21■□□□□ 0.03
TRAM1-201ENST00000262213 NECAP2Q9NVZ3 263 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms