RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 PCNX3Q9H6A9 2034 aa10.09□□□□□ -0.79
TROAP-201ENST00000257909 C9J4A7 227 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 DVL1O14640 695 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 HSPA12AO43301 675 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 TSPAN2O60636 221 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 SCAF4O95104 1147 aaKnown RBP10.08□□□□□ -0.8
TROAP-201ENST00000257909 OR5AC1P0C628 307 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 GIMD1P0DJR0 217 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 KLK2P20151 261 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 SFTPDP35247 375 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 HSF1Q00613 529 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 POU3F1Q03052 451 aaPredicted RBP10.08□□□□□ -0.8
TROAP-201ENST00000257909 JOSD1Q15040 202 aaPredicted RBP10.08□□□□□ -0.8
TROAP-201ENST00000257909 TMEM176BQ3YBM2 270 aaPredicted RBP10.08□□□□□ -0.8
TROAP-201ENST00000257909 ABCA11PQ4W5N1 156 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 ZNF506Q5JVG8 444 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 BEND2Q8NDZ0 799 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 PLPP5Q8NEB5 264 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 OR2AJ1Q8NGZ0 328 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 OR14L1PQ8NHC6 308 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 SLC37A2Q8TED4 501 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 RBMXL1Q96E39 390 aaKnown RBP10.08□□□□□ -0.8
TROAP-201ENST00000257909 RCC1LQ96I51 464 aaKnown RBP10.08□□□□□ -0.8
TROAP-201ENST00000257909 FAM71F1Q96KD3 344 aaPredicted RBP10.08□□□□□ -0.8
TROAP-201ENST00000257909 C18orf12Q96KH6 178 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 HIST1H2BLQ99880 126 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 TMEM242Q9NWH2 141 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 AK3Q9UIJ7 227 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 LIPGQ9Y5X9 500 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 IGKV1D-8A0A087WSZ0 117 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 DHRS7CA6NNS2 312 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 A8MWP6 167 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 ZNF17P17021 662 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 IL11P20809 199 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 RNF4P78317 190 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 EWSR1Q01844 656 aaKnown RBP eCLIP10.08□□□□□ -0.8
TROAP-201ENST00000257909 ICAM4Q14773 271 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 KISS1Q15726 138 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 USF2Q15853 346 aaPredicted RBP10.08□□□□□ -0.8
TROAP-201ENST00000257909 HLA-DQA1Q5Y7H0 255 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 LIAT1Q6ZQX7 453 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 LYZL2Q7Z4W2 148 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 CYB561D1Q8N8Q1 229 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 RNASEH2CQ8TDP1 164 aaKnown RBP10.08□□□□□ -0.8
TROAP-201ENST00000257909 RTN4IP1Q8WWV3 396 aaPredicted RBP10.08□□□□□ -0.8
TROAP-201ENST00000257909 ZNF700Q9H0M5 742 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 MED29Q9NX70 200 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 ANXA10Q9UJ72 324 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 FOXD3Q9UJU5 478 aaPredicted RBP10.08□□□□□ -0.8
TROAP-201ENST00000257909 CYP8B1Q9UNU6 501 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 RCL1Q9Y2P8 373 aaKnown RBP10.08□□□□□ -0.8
TROAP-201ENST00000257909 DOCK8Q8NF50 2099 aa10.08□□□□□ -0.8
TROAP-201ENST00000257909 IGKV3-11P04433 115 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 ZNF43P17038 809 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 ATP6V0CP27449 155 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 ZNF121P58317 390 aaPredicted RBP10.07□□□□□ -0.8
TROAP-201ENST00000257909 HLA-DRB3P79483 266 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 PLCXD2Q0VAA5 305 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 FZD2Q14332 565 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 SP6Q3SY56 376 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 ZNF385CQ66K41 422 aaPredicted RBP10.07□□□□□ -0.8
TROAP-201ENST00000257909 C9orf40Q8IXQ3 194 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 LGI3Q8N145 548 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 FBXL14Q8N1E6 418 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 ZFP62Q8NB50 900 aaPredicted RBP10.07□□□□□ -0.8
TROAP-201ENST00000257909 SLC38A9Q8NBW4 561 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 TMEM234Q8WY98 164 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 FGF14Q92915 247 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 BOD1Q96IK1 185 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 NDUFAF3Q9BU61 184 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 POLR1DQ9Y2S0 133 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 A0A087WZY1 265 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 IGKV1-9A0A0C4DH69 117 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 CDRT15L2A8MXV6 281 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 PITX3O75364 302 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 HBE1P02100 147 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 ZNF728P0DKX0 622 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 HNRNPA2B1P22626 353 aaKnown RBP10.07□□□□□ -0.8
TROAP-201ENST00000257909 RND2P52198 227 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 ZNF133P52736 654 aaPredicted RBP10.07□□□□□ -0.8
TROAP-201ENST00000257909 TLE3Q04726 772 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 PNRC1Q12796 327 aaPredicted RBP10.07□□□□□ -0.8
TROAP-201ENST00000257909 SP5Q6BEB4 398 aaPredicted RBP10.07□□□□□ -0.8
TROAP-201ENST00000257909 SLC16A14Q7RTX9 510 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 TGIF2LXQ8IUE1 241 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 WDFY1Q8IWB7 410 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 OR2C3Q8N628 320 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 METTL27Q8N6F8 245 aaPredicted RBP10.07□□□□□ -0.8
TROAP-201ENST00000257909 OR52M1Q8NGK5 317 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 OR10G4Q8NGN3 311 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 ZNF721Q8TF20 911 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 RELTQ969Z4 430 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 MVB12AQ96EY5 273 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 SOX7Q9BT81 388 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 HIPK2Q9H2X6 1198 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 CHST11Q9NPF2 352 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 NECAP2Q9NVZ3 263 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 PLEKHJ1Q9NW61 149 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 DKKL1Q9UK85 242 aa10.07□□□□□ -0.8
TROAP-201ENST00000257909 MCTS1Q9ULC4 181 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms