RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 DUX1O43812 170 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 SSSCA1O60232 199 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 NPIPB7O75200 414 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 TAGLN2P37802 199 aaKnown RBP10.5□□□□□ -0.73
USHBP1-201ENST00000252597 RUNX1Q01196 453 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 GNMTQ14749 295 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 OR2G3Q8NGZ4 309 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 OR6S1Q8NH40 331 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 SLC22A8Q8TCC7 542 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 TGIF2Q9GZN2 237 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 CARHSP1Q9Y2V2 147 aaKnown RBP10.5□□□□□ -0.73
USHBP1-201ENST00000252597 RBM7Q9Y580 266 aaKnown RBP10.5□□□□□ -0.73
USHBP1-201ENST00000252597 KPTNQ9Y664 436 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 TPRP12270 2363 aaKnown RBP10.5□□□□□ -0.73
USHBP1-201ENST00000252597 ISG15P05161 165 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 UBE2KP61086 200 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 RPS18P62269 152 aaKnown RBP10.5□□□□□ -0.73
USHBP1-201ENST00000252597 POLR2GP62487 172 aaKnown RBP eCLIP10.5□□□□□ -0.73
USHBP1-201ENST00000252597 TMEM268Q5VZI3 342 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 POC1AQ8NBT0 407 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 ZNF837Q96EG3 531 aaPredicted RBP10.5□□□□□ -0.73
USHBP1-201ENST00000252597 ZNF385AQ96PM9 386 aaKnown RBP10.5□□□□□ -0.73
USHBP1-201ENST00000252597 PRO1933Q9H354 126 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 C19orf12Q9NSK7 152 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 PLA2G2EQ9NZK7 142 aa10.5□□□□□ -0.73
USHBP1-201ENST00000252597 F8VVB4 439 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 F8VWA3 439 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 TRAPPC6AO75865 159 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 MBPP02686 304 aaPredicted RBP10.49□□□□□ -0.73
USHBP1-201ENST00000252597 RAB5AP20339 215 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 PLXDC1Q8IUK5 500 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 FBXL14Q8N1E6 418 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 ARHGEF39Q8N4T4 335 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 WDSUB1Q8N9V3 476 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 BORCS8Q96FH0 119 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 RHOVQ96L33 236 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 ALKBH3Q96Q83 286 aaPredicted RBP10.49□□□□□ -0.73
USHBP1-201ENST00000252597 PAPOLGQ9BWT3 736 aaKnown RBP10.49□□□□□ -0.73
USHBP1-201ENST00000252597 FBRSQ9HAH7 460 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 P4HTMQ9NXG6 502 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 GEMIN2O14893 280 aaKnown RBP10.49□□□□□ -0.73
USHBP1-201ENST00000252597 SCGNO76038 276 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 TIAF1O95411 115 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 HLA-HP01893 362 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 HNRNPKP61978 463 aaKnown RBP eCLIP10.49□□□□□ -0.73
USHBP1-201ENST00000252597 SMAD4Q13485 552 aaKnown RBP10.49□□□□□ -0.73
USHBP1-201ENST00000252597 IZUMO4Q1ZYL8 232 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 THEM4Q5T1C6 240 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 DOK3Q7L591 496 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 ZNF561Q8N587 486 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 NOXO1Q8NFA2 376 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 ULBP2Q9BZM5 246 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 SRPK3Q9UPE1 567 aa10.49□□□□□ -0.73
USHBP1-201ENST00000252597 TNRC18O15417 2968 aaPredicted RBP10.49□□□□□ -0.73
USHBP1-201ENST00000252597 ZFP92A6NM28 416 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 M0R135 149 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 IFNA4P05014 189 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 MELTFP08582 738 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 ACKR3P25106 362 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 APOBEC1P41238 236 aaKnown RBP10.48□□□□□ -0.73
USHBP1-201ENST00000252597 SPEM2Q0P670 501 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 FAHD2BQ6P2I3 314 aaPredicted RBP10.48□□□□□ -0.73
USHBP1-201ENST00000252597 TMEM156Q8N614 296 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 ZNF799Q96GE5 643 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 FAHD2AQ96GK7 314 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 AQP10Q96PS8 301 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 ALKBH4Q9NXW9 302 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 LIPGQ9Y5X9 500 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 NBEAQ8NFP9 2946 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 POLEQ07864 2286 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 A0A1B0GTQ1 180 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 C2CD4DB7Z1M9 353 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 MFNGO00587 321 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 HMGB3O15347 200 aaKnown RBP10.48□□□□□ -0.73
USHBP1-201ENST00000252597 RPS16P62249 146 aaKnown RBP10.48□□□□□ -0.73
USHBP1-201ENST00000252597 QRFPP83859 136 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 NKAIN1Q4KMZ8 207 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 CACFD1Q9UGQ2 172 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 AK3Q9UIJ7 227 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 H0YL77 283 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 HSD17B6O14756 317 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 SRSF10O75494 262 aaKnown RBP10.48□□□□□ -0.73
USHBP1-201ENST00000252597 CLN5O75503 358 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 CCL2P13500 99 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 B4GALT1P15291 398 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 SULT1A2P50226 295 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 CCL20P78556 96 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 SNAI3Q3KNW1 292 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 OR10D4PQ8NGN7 298 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 IL1F10Q8WWZ1 152 aa10.48□□□□□ -0.73
USHBP1-201ENST00000252597 MYOZ1Q9NP98 299 aaPredicted RBP10.48□□□□□ -0.73
USHBP1-201ENST00000252597 ROS1P08922 2347 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 ANKUB1A6NFN9 424 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 ZNF724A8MTY0 619 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 SCRG1O75711 98 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 MT-ND4LP03901 98 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 TBPP20226 339 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 S100PP25815 95 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 NAAAQ02083 359 aa10.47□□□□□ -0.73
USHBP1-201ENST00000252597 GPR157Q5UAW9 335 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms