RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 GEMIN2O14893 280 aaKnown RBP13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 SPRED3Q2MJR0 410 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 HTR3DQ70Z44 454 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 ANAPC16Q96DE5 110 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 FABP2P12104 132 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 PRRX1P54821 245 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 OTPQ5XKR4 325 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 MAMSTRQ6ZN01 415 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 SLC16A13Q7RTY0 426 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 SPRED1Q7Z699 444 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 OR5M9Q8NGP3 310 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 CYB5R1Q9UHQ9 305 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 AMMECR1Q9Y4X0 333 aaPredicted RBP13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 IFITM10A6NMD0 228 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 DNAL4O96015 105 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 HFEQ30201 348 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 KLF16Q9BXK1 252 aaPredicted RBP13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 MS4A8Q9BY19 250 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 MANBALQ9NQG1 85 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 PYCARD-AS1I3L0S3 204 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 LIMK1P53667 647 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 ELAVL1Q15717 326 aaKnown RBP13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 NKAIN1Q4KMZ8 207 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 TMEM99Q8N816 258 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 BCORP1Q8N888 145 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 BVESQ8NE79 360 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 PTX4Q96A99 478 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 CDC14BO60729 498 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 APCSP02743 223 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 FUT6P51993 359 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 GFRALQ6UXV0 394 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 STAC2Q6ZMT1 411 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 LRRTM3Q86VH5 581 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 RPS19BP1Q86WX3 136 aaKnown RBP13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 ATOH8Q96SQ7 321 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 TIMP4Q99727 224 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 S1PR5Q9H228 398 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 PGPEP1Q9NXJ5 209 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 SCN11AQ9UI33 1791 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 SYNGR2O43760 224 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 ZNF253O75346 499 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 NKAIN4Q8IVV8 208 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 OR4C13Q8NGP0 309 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 ZDHHC5Q9C0B5 715 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 TMEM129A0AVI4 362 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 MEX3AA1L020 520 aaKnown RBP13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 IGHV3-13P01766 116 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 IGHV3-7P01780 117 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 IGHA1P01876 353 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 IGHA2P01877 340 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 SMAGPQ0VAQ4 97 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 HLA-BQ31612 363 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 SAXO2Q658L1 398 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 ZNF296Q8WUU4 475 aaPredicted RBP13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 C11orf68Q9H3H3 251 aaKnown RBP13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 OCIAD1Q9NX40 245 aa13.15□□□□□ -0.3
SPTLC2-201ENST00000216484 PRSS37A4D1T9 235 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 CDAP32320 146 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 KIR2DS2P43631 304 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 FABP5Q01469 135 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 CTU2Q2VPK5 515 aaKnown RBP13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 UBE2ZQ9H832 354 aaPredicted RBP13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 PLEKHB1Q9UF11 243 aaPredicted RBP13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 FAHP16930 419 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 MEOX2P50222 304 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 DEFB109BQ30KR1 87 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 CLLU1OSQ5K130 101 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 KMT5CQ86Y97 462 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 DYNLT3P51808 116 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 TMEM207Q6UWW9 146 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 TAS1R1Q7RTX1 841 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 DND1Q8IYX4 353 aaKnown RBP13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 MON2Q7Z3U7 1717 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 A0A1W2PPC4 97 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 IGSF23A1L1A6 192 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 ICOSLGO75144 302 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 RPL18Q07020 188 aaKnown RBP13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 IZUMO4Q1ZYL8 232 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 CALHM1Q8IU99 346 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 OR2T10Q8NGZ9 312 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 DUSP21Q9H596 190 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 GSTZ1O43708 216 aaPredicted RBP13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 VSIG4Q9Y279 399 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 TRAV39A0A0B4J263 110 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 RTP5Q14D33 572 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 SHBQ15464 509 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 C10orf126Q8N4M7 172 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 LMO3Q8TAP4 145 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 SPPL3Q8TCT6 385 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 EID2BQ96D98 161 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 A4GNTQ9UNA3 340 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 ZFP30Q9Y2G7 519 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 GAGE10A6NGK3 116 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 ISLRO14498 428 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 NCMAPQ5T1S8 102 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 MAP6Q96JE9 813 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 OXGR1Q96P68 337 aa13.14□□□□□ -0.31
SPTLC2-201ENST00000216484 LYRM4Q9HD34 91 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms