RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 COL4A4P53420 1690 aaPredicted RBP10.6□□□□□ -0.71
CHPF2-201ENST00000035307 LRP3O75074 770 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 CST7O76096 145 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 HPP00738 406 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 HOXA6P31267 233 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 TMEM268Q5VZI3 342 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 ZNF626Q68DY1 528 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 ACOT7LQ6ZUV0 252 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 SLC38A6Q8IZM9 456 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 OR56B2PQ8NGI1 322 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 EXTL1Q92935 676 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 TGIF2Q9GZN2 237 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 FAM96BQ9Y3D0 163 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 NTN3O00634 580 aaPredicted RBP10.6□□□□□ -0.71
CHPF2-201ENST00000035307 RRP8O43159 456 aaKnown RBP10.6□□□□□ -0.71
CHPF2-201ENST00000035307 BPNT1O95861 308 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 TTRP02766 147 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 RAC2P15153 192 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 PTAFRP25105 342 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 CSRP2Q16527 193 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 PABPC1L2AQ5JQF8 200 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 C19orf48Q6RUI8 117 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 CATSPERDQ86XM0 798 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 TMEM251Q8N6I4 163 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 OR2M7Q8NG81 312 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 BCO1Q9HAY6 547 aa10.6□□□□□ -0.71
CHPF2-201ENST00000035307 SLC22A20A6NK97 555 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 ATP6V1G2-DDX39BF2Z307 99 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 TGM6O95932 706 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 SULT1A3P0DMM9 295 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 SULT1A4P0DMN0 295 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 HIST1H1DP16402 221 aaKnown RBP10.59□□□□□ -0.71
CHPF2-201ENST00000035307 EDDM3BP56851 147 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 RAB32Q13637 225 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 OR2T2Q6IF00 324 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 OR8G2PQ6IF36 304 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 M1APQ8TC57 530 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 NANOS1Q8WY41 292 aaKnown RBP10.59□□□□□ -0.71
CHPF2-201ENST00000035307 ZNF837Q96EG3 531 aaPredicted RBP10.59□□□□□ -0.71
CHPF2-201ENST00000035307 NELFAQ9H3P2 528 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 TAF9BQ9HBM6 251 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 ZNF732B4DXR9 585 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 TIMM8AO60220 97 aaPredicted RBP10.59□□□□□ -0.71
CHPF2-201ENST00000035307 RAB1AP62820 205 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 RAC1P63000 192 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 ANGPTL6Q8NI99 470 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 OPN4Q9UHM6 478 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 EDARQ9UNE0 448 aa10.59□□□□□ -0.71
CHPF2-201ENST00000035307 CHCHD2Q9Y6H1 151 aaPredicted RBP10.59□□□□□ -0.71
CHPF2-201ENST00000035307 A0A0G2JK05 382 aa10.58□□□□□ -0.71
CHPF2-201ENST00000035307 SOX15O60248 233 aa10.58□□□□□ -0.71
CHPF2-201ENST00000035307 GAS1P54826 345 aa10.58□□□□□ -0.71
CHPF2-201ENST00000035307 SELENOVP59797 346 aa10.58□□□□□ -0.71
CHPF2-201ENST00000035307 TMEM182Q6ZP80 229 aaPredicted RBP10.58□□□□□ -0.71
CHPF2-201ENST00000035307 SSX9Q7RTT3 188 aa10.58□□□□□ -0.71
CHPF2-201ENST00000035307 TMEM229BQ8NBD8 167 aa10.58□□□□□ -0.71
CHPF2-201ENST00000035307 OR1F12Q8NHA8 337 aa10.58□□□□□ -0.71
CHPF2-201ENST00000035307 LOXL4Q96JB6 756 aa10.58□□□□□ -0.71
CHPF2-201ENST00000035307 TTTY12Q9BZ98 90 aa10.58□□□□□ -0.71
CHPF2-201ENST00000035307 DEPPQ9NTK1 212 aa10.58□□□□□ -0.71
CHPF2-201ENST00000035307 NECAP2Q9NVZ3 263 aa10.58□□□□□ -0.71
CHPF2-201ENST00000035307 GNG12Q9UBI6 72 aa10.58□□□□□ -0.71
CHPF2-201ENST00000035307 PINLYPA6NC86 204 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 MKRN2OSH3BPM6 223 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 CDC14BO60729 498 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 AQP8O94778 261 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 OR52H1Q8NGJ2 320 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 RNF141Q8WVD5 230 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 MARC2Q969Z3 335 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 OCSTAMPQ9BR26 566 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 SCNM1Q9BWG6 230 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 TRGV8A0A0C4DH27 118 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 LOC105371267A0A1B0GV96 52 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 MS4A18H0YCH9 400 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 DLL1O00548 723 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 SSSCA1O60232 199 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 ONECUT2O95948 504 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 S100A2P29034 98 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 LIMK1P53667 647 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 MS4A18Q3C1V0 323 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 ACTBL2Q562R1 376 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 OR13C8Q8NGS7 320 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 MED30Q96HR3 178 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 IMMP1LQ96LU5 166 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 LINC00052Q96N35 136 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 GPR87Q9BY21 358 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 KLK13Q9UKR3 277 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 TXNL1O43396 289 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 CLPSP04118 112 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 IAPPP10997 89 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 ELLP55199 621 aaPredicted RBP10.58□□□□□ -0.72
CHPF2-201ENST00000035307 SUMO3P55854 103 aaPredicted RBP10.58□□□□□ -0.72
CHPF2-201ENST00000035307 CLEC12BQ2HXU8 276 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 C11orf87Q6NUJ2 197 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 Q6ZRG5 221 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 RFESDQ8TAC1 157 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 WNT2BQ93097 391 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 CPNE4Q96A23 557 aaPredicted RBP10.58□□□□□ -0.72
CHPF2-201ENST00000035307 ADAM19Q9H013 955 aa10.58□□□□□ -0.72
CHPF2-201ENST00000035307 WASF3Q9UPY6 502 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms